Journals / Türkiye Tarımsal Araştırmalar Dergisi / 2021 / Cilt: 8 - Sayı: 3

Identification of Seedborne Fungi on Soybean (Glycine max L.) Seeds Grown in Mediterranean Region of Turkey

Pages
367–373
Publication Date
2021-10-31
DOI
—
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

BLASTn analysis of each sequence showed that the sequences of the fungi had the similarity (99%) to the fungal isolates deposited in the GenBank.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Soybean (Glycine max L.) is one of the most valuable oilseed crops in the world.
📊
Key Findings & Data:The soybean yield is affected by various biotic and abiotic stress factors in all growing seasons.
💡
Conclusion & Impact:BLASTn analysis of each sequence showed that the sequences of the fungi had the similarity (99%) to the fungal isolates deposited in the GenBank.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Soybean · seedborne fungi · seed decay

Abstract

Soybean (Glycine max L.) is one of the most valuable oilseed crops in the world. It is not only an oil seed crop and feed for livestock, but also valuable mineral and vitamins sources for the human diet. The soybean yield is affected by various biotic and abiotic stress factors in all growing seasons. Diseases are one of the most significant biotic factors that reduce soybean growth and yield. Fungi are important pathogens affecting yield and quality by attacking plants during the growth period and after harvest. This study was conducted to detect and identify the seed-borne fungi associated with the soybean seed. From this context, 150 soybean seeds were randomly chosen from the experimental fields of Akdeniz University in Antalya province of Turkey. These seeds were sterilized with 70% ethanol for 1 min, followed by 10% sodium hypochlorite for 1 min and then rinsed with sterile water and then placed in Petri plates by using the agar plate method. A total of four seed-borne fungi species namely Aspergillus spp., Penicillium spp., Cladosporium spp. and Fusarium spp. were isolated from the soybean seeds. Additionally, Genomic DNAs of these fungal species were extracted and the internal transcribed spacer (ITS) region of ribosomal DNA was amplified with the ITS-1 and ITS-4 primers using a thermal cycler. After sequencing of amplified products, the sequences were aligned. BLASTn analysis of each sequence showed that the sequences of the fungi had the similarity (99%) to the fungal isolates deposited in the GenBank.

Özet

Soybean (Glycine max L.) is one of the most valuable oilseed crops in the world. It is not only an oil seed crop and feed for livestock, but also valuable mineral and vitamins sources for the human diet. The soybean yield is affected by various biotic and abiotic stress factors in all growing seasons. Diseases are one of the most significant biotic factors that reduce soybean growth and yield. Fungi are important pathogens affecting yield and quality by attacking plants during the growth period and after harvest. This study was conducted to detect and identify the seed-borne fungi associated with the soybean seed. From this context, 150 soybean seeds were randomly chosen from the experimental fields of Akdeniz University in Antalya province of Turkey. These seeds were sterilized with 70% ethanol for 1 min, followed by 10% sodium hypochlorite for 1 min and then rinsed with sterile water and then placed in Petri plates by using the agar plate method. A total of four seed-borne fungi species namely Aspergillus spp., Penicillium spp., Cladosporium spp. and Fusarium spp. were isolated from the soybean seeds. Additionally, Genomic DNAs of these fungal species were extracted and the internal transcribed spacer (ITS) region of ribosomal DNA was amplified with the ITS-1 and ITS-4 primers using a thermal cycler. After sequencing of amplified products, the sequences were aligned. BLASTn analysis of each sequence showed that the sequences of the fungi had the similarity (99%) to the fungal isolates deposited in the GenBank.

🔖

Cite This Article

ÜSTÜN, R., ÇAT, A., ÇATAL, M., UZUN, B. (2021). Identification of Seedborne Fungi on Soybean (Glycine max L.) Seeds Grown in Mediterranean Region of Turkey. Türkiye Tarımsal Araştırmalar Dergisi, Cilt: 8 - Sayı: 3, 367–373. https://ajindex.com/articles/387195

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (9)

  1. Ahammed, S.K., Anandam, R.J., Babu, P.G., Munikrishnaiah, M., Gopal, K., 2006. Studies on seed mycoflora of soybean and its effect on seed and seedling quality characters. Legume Research, 29(3): 186-190.
  2. Ahmad, A., Hayat, I., Arif, S., Masud, T., Khalid, N., Ahmed, A., 2014. Mechanisms involved in the therapeutic effects of soybean (Glycine max). International Journal of Food Properties, 17(6): 1332-1354.
  3. Ahmed, O., Balogun, O.S., Fawole, O.B., Fabiyi, O.A., Hussein, A.T., Kassoum, K.O., 2016. Seed-borne fungi of soybeans (Glycine max) in the guinea savannah agroecology of Nigeria. Journal of Agricultural Sciences Belgrade, 61(1): 57-68.
  4. Alemu, K., 2014. Seedborne fungal pathogen associated with soybean (Glycine max L.) and their management in Jimma, Southwestern Ethiopia. Journal of Biology, Agriculture and Healthcare, 25(4): 14-19. Anonymous, 2021a. Statistic Databases. American Soybean Association SoyStats. (http://soystats.com/ international-world-soybean-production/), (Accessed date: 19.10.2021). Anonymous, 2021b. Crop Production Statistics. Turkish Statistical Institute, (https://biruni.tuik.gov.tr/medas), (Accessed date: 19.10.2021).
  5. Barnett, H.L., Hunter, B.B., 1987. Illustrated Genera of Imperfect Fungi. 4th Ed., MacMillian, NewYork. Catal, M., Adams, G.C., Fulbrigt, D.W., 2010. Evaluation of resistance to rhabdocline needlecast in douglas fir variety shuswap, with quantitative polymerase chain reaction. Phytopathology, 100(4): 337-344.
  6. Chang, X., Li, H., Naeem, M., Wu, X., Yong, T., Song, C., Liu, T., Chen, W., Yang, W., 2020. Diversity of the seedborne fungi and pathogenicity of fusarium species associated with intercropped soybean. Pathogens, 9(7): 531. Chiotta, M.L., Alaniz Zanon, M.S., Palazzini, J.M., Scandiani, M.M., Formento, A.N., Barros, G.G., Chulze, S.N., 2016. Pathogenicity of Fusarium graminearum and F. meridionale on soybean pod blight and trichothecene accumulation. Plant Pathology, 65(9): 1492-1497.
  7. Escamilla, D., Rosso, M.L., Zhang, B., 2019. Identification of fungi associated with soybeans and effective seed disinfection treatments. Food Science and Nutrition, 7(10): 3194-3205.
  8. Gutleb, A.C., Caloni, F., Giraud, F., Cortinovis, C., Pizzo, F., Hoffmann, L., Bohn, T., Pasquali, M., 2015. Detection of multiple mycotoxin occurrences in soy animal feed by traditional mycological identification combined with molecular species identification. Toxicology Reports, 2: 275-279.
  9. Hall, T.A., 1999. BioEdit: a user-friendly biological sequence