Journals / The Anatolian Journal of Cardiology / 2015 / Cilt: 15 - Sayı: 3

Evaluation of association between common genetic variants on hromosome 9p21 and coronary artery disease in Turkish population

Pages
196–203
DOI
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⚡ TL;DR(Too Long; Didn't Read)

Conclusion: The rs2383207 and rs1333049 SNPs on 9p21 chromosome were significantly associated with the risk and severity of CAD in the Turkish population.

📌 3 Key Takeaways

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Objective & Hypothesis:Objective: Coronary artery disease (CAD), which develops from complex interactions between genetic and enviromental factors, is a leading cause of death worldwide.
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Key Findings & Data:Based on genome-wide association studies (GWAS), the chromosomal region 9p21 has been identified as the most relevant locus presenting a strong association with CAD in different populations.
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Conclusion & Impact:Conclusion: The rs2383207 and rs1333049 SNPs on 9p21 chromosome were significantly associated with the risk and severity of CAD in the Turkish population.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Domain Parameters

Abstract

Objective: Coronary artery disease (CAD), which develops from complex interactions between genetic and enviromental factors, is a leading cause of death worldwide. Based on genome-wide association studies (GWAS), the chromosomal region 9p21 has been identified as the most relevant locus presenting a strong association with CAD in different populations. The aim of the present study was to investigate the association of two SNPs on chromosome 9p21 on susceptibility to CAD and the effect of these SNPs along with cardiovascular risk factors on the severity of CAD in the Turkish population. Methods: This study had an observational case-control design. We genotyped 460 subjects, aged 30-65 years, to investigate the association of 2 SNPs (rs1333049, rs2383207) on chromosome 9p21 and CAD risk in Turkish population. Real-time polymerase chain reaction (RT-PCR) was used to analyze the 2 SNPs in CAD patients and healthy controls. The genotype and allelic variations of these SNPs with the severity of CAD was also assessed using semi-quantitative methods such as the Gensini score. Student s t test and multiple regression analysis were used for statistical analysis. Results: The SNPs rs1333049 and rs2383207 were found to be associated with CAD with an adjusted OR of 1.81 (95% Cl 1.05-3.12) and 2.12 (95% CI 1.19-4.10) respectively. After adjustment of CAD risk factors such as smoking, family history of CAD and diabetes, the homozygous AA geno- type for rs2383207 increased the CAD risk with an OR 3.69. Also a very strong association was found between rs1333049 and rs2383207 and Gensini scores representing the severity of CAD (p<0.001). Conclusion: The rs2383207 and rs1333049 SNPs on 9p21 chromosome were significantly associated with the risk and severity of CAD in the Turkish population.

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Cite This Article

ÇAKMAK, H. A., BAYOĞLU, B., DURMAZ, E., CAN, G., KARADAĞ, B., CENGİZ, M., VURAL, V. A., YÜKSEL, H. (2015). Evaluation of association between common genetic variants on hromosome 9p21 and coronary artery disease in Turkish population. The Anatolian Journal of Cardiology, Cilt: 15 - Sayı: 3, 196–203. https://ajindex.com/articles/365931

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References (13)

  1. Chen Z, Qian Q, Ma G, Wang J, Zhang X, Feng Y, et al. A common variant on chromosome 9p21 affects the risk of early-onset coro- nary artery disease. Mol Biol Rep 2009
  2. [CrossRef] 2. Thom TJ, Epstein FH. Heart disease, cancer, and stroke mortality trends and their interrelations. An international perspective. Circulation 1994
  3. [CrossRef] 3. Wilson PW. Established risk factors and coronary artery disease: The Framingham Study. Am J Hypertens 1994
  4. Shea S, Ottman R, Gabrieli C, Stein Z, Nichols A. Family history as an independent risk factor for coronary artery disease. J Am Coll Cardiol 1984
  5. [CrossRef] 5. Helgadottir A, Thorleifsson G, Manolescu A, Gretarsdottir S, Blondal T, Jonasdottir A, et al. A common variant on chromosome 9p21 affects the risk of myocardial infarction. Science 2007
  6. [CrossRef] 6. McPherson R, Pertsemlidis A, Kavaslar N, Stewart A, Roberts R, Cox DR, et al. A common allele on chromosome 9 associated with coronary heart disease. Science 2007
  7. [CrossRef] 7. Christensen K, Murray JC. What genome-wide association studies can do for medicine. N Engl J Med 2007
  8. [CrossRef] 8. Wellcome Trust Case Control Consortium. Genome-wide associa- tion study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 2007
  9. [CrossRef] 9. Schunkert H, Götz A, Braund P, McGinnis R, Tregouet DA, Mangino M, et al. Cardiogenics Consortium. Repeated replication and a prospective meta-analysis of the association between chromo- some 9p21.3 and coronary artery disease. Circulation 2008
  10. [CrossRef] 10. Samani NJ, Erdmann J, Hall AS, Hengstenberg C, Mangino M, Mayer B, et al. WTCCC and the Cardiogenics Consortium. Genomewide association analysis of coronary artery disease. N Engl J Med 2007
  11. [CrossRef] 11. Shen GQ, Li L, Rao S, Abdullah KG, Ban JM, Lee BS, et al. Four SNPs on chromosome 9p21 in a South Korean population implicate a genetic locus that confers high cross-race risk for development of coronary artery disease. Arterioscler Thromb Vasc Biol 2008
  12. [CrossRef] 12. Hinohara K, Nakajima T, Takahashi M, Hohda S, Sasaoka T, Nakahara K, et al. Replication of the association between a chromosome 9p21 polymorphism and coronary artery disease in Japanese and Korean populations. J Hum Genet 2008
  13. [CrossRef] 13. Zhou LT, Qin L, Zheng DC, Song ZK, Ye L. Meta-analysis of genetic association of chromosom