Journals / NATURENGS / 2026 / Volume: 7 Issue: 1

Screening of Phosphate-Solubilizing and Potential Nitrogen-Fixing Bacteria from Apple Orchards in Karaman

Suzan Sahin Dogan(KARAMANOĞLU MEHMETBEY ÜNİVERSİTESİ)0000-0002-1554-0080
Aytaç Kocabaş(KARAMANOĞLU MEHMETBEY ÜNİVERSİTESİ)0000-0001-7622-1932
Journal
NATURENGS
Pages
—
Publication Date
2026-10-27
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AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

The results indicate that apple orchard soil is a valuable source of bacteria with functional traits potentially associated with plant nutrient cycling.

📌 3 Key Takeaways

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Objective & Hypothesis:The aim of this study was to isolate and molecularly identify bacteria capable of growing in nitrogen-free medium and solubilizing phosphate from apple orchard soil.
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Key Findings & Data:Taxonomic identification of the isolates was performed based on sequencing of the V4 region of the 16S rRNA gene.
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Conclusion & Impact:The results indicate that apple orchard soil is a valuable source of bacteria with functional traits potentially associated with plant nutrient cycling.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:phosphate solubility · potential nitrogen fixation · bacterial isolates

Abstract

The aim of this study was to isolate and molecularly identify bacteria capable of growing in nitrogen-free medium and solubilizing phosphate from apple orchard soil. Bacterial isolates were recovered from apple orchard soil, and those capable of growing on nitrogen-free medium and solubilizing phosphate were identified. Taxonomic identification of the isolates was performed based on sequencing of the V4 region of the 16S rRNA gene. A total of eight bacterial isolates capable of growing in nitrogen-free medium and 13 phosphate-solubilizing bacterial isolates were obtained. The isolates capable of growing in nitrogen-free medium were affiliated with the genera Pantoea, Streptomyces, Pseudomonas, Agrobacterium, Variovorax, and Rhizobium. The phosphate-solubilizing isolates were affiliated with the genera Pantoea, Enterobacter, Agrobacterium, Acinetobacter, Pseudomonas, Bacillus, Rhizobium, Streptomyces, and Sphingobacterium. Notably, Pseudomonas-related isolates represented a substantial proportion of the phosphate-solubilizing bacterial collection. The results indicate that apple orchard soil is a valuable source of bacteria with functional traits potentially associated with plant nutrient cycling. In particular, isolates capable of solubilizing phosphate and growing in nitrogen-free medium may represent promising candidates for further evaluation as plant growth-promoting microorganisms. These indigenous isolates could be further investigated for their potential use as microbial inoculants to support sustainable agricultural production.

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Cite This Article

Dogan, S. S., Kocabaş, A. (2026). Screening of Phosphate-Solubilizing and Potential Nitrogen-Fixing Bacteria from Apple Orchards in Karaman. NATURENGS, Volume: 7 Issue: 1. https://doi.org/10.46572/naturengs.2022782

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References (28)

  1. Chen, Y.P., Rekha, P.D., Arun, A.B., Shen, F.T., Lai, W.-A., and Young, C.C., (2006). Phosphate Solubilizing Bacteria from Subtropical Soil and Their Tricalcium Phosphate Solubilizing Abilities. Applied Soil Ecology, 34, 33-41.
  2. Westhoff, P., (2009). The Economics of Biological Nitrogen Fixation in the Global Economy, pp. 309-328.
  3. Ritika, B., and Utpal, D., (2014). Biofertilizer, a Way towards Organic Agriculture: A Review. African Journal of Microbiology Research, 8, 2332-2343.
  4. Bhattacharyya, P.N., and Jha, D.K., (2012). Plant Growth-Promoting Rhizobacteria (PGPR): Emergence in Agriculture. World Journal of Microbiology and Biotechnology, 28, 1327-1350.
  5. Vacheron, J., Desbrosses, G., Bouffaud, M.-L., Touraine, B., Moënne-Loccoz, Y., Muller, D., Legendre, L., Wisniewski-Dyé, F., and Prigent-Combaret, C., (2013). Plant Growth-Promoting Rhizobacteria and Root System Functioning. Frontiers in Plant Science, 4.
  6. Timofeeva, A., Galyamova, M., and Sedykh, S., (2022). Prospects for Using Phosphate-Solubilizing Microorganisms as Natural Fertilizers in Agriculture. Plants, 11, 2119.
  7. Rodríguez, H., and Fraga, R., (1999). Phosphate Solubilizing Bacteria and Their Role in Plant Growth Promotion. Biotechnology Advances, 17, 319-339.
  8. Fadiji, A.E., Xiong, C., Egidi, E., and Singh, B.K., (2024). Formulation Challenges Associated with Microbial Biofertilizers in Sustainable Agriculture and Paths Forward. Journal of Sustainable Agriculture and Environment, 3.
  9. Obelenwa, U.C., and Ugwuanyi, J.O., (2023). Development of Bacteria Biofertilizers Using Locally Isolated Rhizosphere Populations and Agricultural Refuse and Their Impacts on Growth of Local Test Crops. International Journal of Phytoremediation, 25, 1248-1258.
  10. Sutay Kocabaş, D., Tur, E., and Kocabaş, A., (2015). Phytochemical Analysis of Some Native Apple Varieties and Valorization of Apple Tree Leaves for Xylanase Production. GIDA / The Journal of Food, 40(5), 271–278.
  11. Dereeper, A., Guignon, V., Blanc, G., Audic, S., Buffet, S., Chevenet, F., Dufayard, J.-F., Guindon, S., Lefort, V., Lescot, M., et al., (2008). Phylogeny.Fr: Robust Phylogenetic Analysis for the Non-Specialist. Nucleic Acids Research, 36, W465-W469.
  12. Steenwyk, J.L., Loucks, J.T., and Buida, T.J., (2025). ClipKIT in the Browser: Fast Online Trimming of Multiple Sequence Alignments for Phylogenetics. Nucleic Acids Research, 53, W169-W171.
  13. Katoh, K., and Standley, D.M., (2013). MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Molecular Biology and Evolution, 30, 772-780.
  14. Price, M.N., Dehal, P.S., and Arkin, A.P., (2010). FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments. PLoS ONE, 5, e9490.
  15. Ansari, F.A., Ahmad, I., Pichtel, J., and Husain, F.M., (2024). Pantoea Agglomerans FAP10: A Novel Biofilm-Producing PGPR Strain Improves Wheat Growth and Soil Resilience under Salinity Stress. Environmental and Experimental Botany, 222, 105759.
  16. Aslantaş, R., Çakmakçi, R., and Şahin, F., (2007). Effect of Plant Growth Promoting Rhizobacteria on Young Apple Tree Growth and Fruit Yield under Orchard Conditions. Scientia Horticulturae, 111, 371-377.
  17. Sasaki, Y., Takaya, N., Morita, A., Nakamura, A., and Shoun, H., (2014). Nitrite Formation from Organic Nitrogen by Streptomyces Antibioticus Supporting Bacterial Cell Growth and Possible Involvement of Nitric Oxide as an Intermediate. Bioscience, Biotechnology, and Biochemistry, 78, 1592-1602.
  18. Li, J., Lu, J., Wang, H., Fang, Z., Wang, X., Feng, S., Wang, Z., Yuan, T., Zhang, S., Ou, S., et al., (2021). A Comprehensive Synthesis Unveils the Mysteries of Phosphate-Solubilizing Microbes. Biological Reviews, 96, 2771-2793.
  19. Olanrewaju, O.S., Glick, B.R., and Babalola, O.O., (2017). Mechanisms of Action of Plant Growth Promoting Bacteria. World Journal of Microbiology and Biotechnology, 33, 197.
  20. Pan, L., and Cai, B., (2023). Phosphate-Solubilizing Bacteria: Advances in Their Physiology, Molecular Mechanisms and Microbial Community Effects. Microorganisms, 11, 2904.
  21. Rai, A., Sharma, N.K., Singh, V.K., Dwivedi, B.S., Singh, J.S., and Rai, P.K., (2023). Study of Phosphate Solubilizing Fluorescent Pseudomonas Recovered from Rhizosphere and Endorhizosphere of Aloe Barbadensis (L.). Geomicrobiology Journal, 40, 347-359.
  22. Kruasuwan, W., and Thamchaipenet, A., (2016). Diversity of Culturable Plant Growth-Promoting Bacterial Endophytes Associated with Sugarcane Roots and Their Effect of Growth by Co-Inoculation of Diazotrophs and Actinomycetes. Journal of Plant Growth Regulation, 35, 1074-1087.
  23. Amaresan, N., Kumar, K., Naik, J.H., Bapatla, K.G., and Mishra, R.K., (2018). Streptomyces in Plant Growth Promotion. in New and Future Developments in Microbial Biotechnology and Bioengineering, Elsevier, pp. 125-135.
  24. Soltani, H., Hassani, A., Baba Akbari Sari, M., and Hanifei, M., (2025). The Phosphate Solubilizing and N Fixing Pantoea Agglomerans Bacteria Affecting Yield and Biochemical Properties Including Nutrient Uptake of Different Tomato Genotypes. Journal of Trace Elements and Minerals, 12, 100225.
  25. Sultana, R., Jashim, A.I.I., Islam, S.M.N., Rahman, M.H., and Haque, M.M., (2024). Bacterial Endophyte Pseudomonas Mosselii PR5 Improves Growth, Nutrient Accumulation, and Yield of Rice (Oryza Sativa L.) through Various Application Methods. BMC Plant Biology, 24, 1030.
  26. Bizjak, T., Sellstedt, A., Gratz, R., and Nordin, A., (2023). Presence and Activity of Nitrogen-Fixing Bacteria in Scots Pine Needles in a Boreal Forest: A Nitrogen-Addition Experiment. Tree Physiology, 43, 1354-1364.
  27. Zhang, H., Bai, X., Han, Y., and Han, L., (2023). Stress-Resistance and Growth-Promoting Characteristics and Effects on Vegetable Seed Germination of Streptomyces Sp. Strains Isolated from Wetland Plant Rhizospheres. Current Microbiology, 80, 190.
  28. Fang, K., Bao, Z.-S.-N., Chen, L., Zhou, J., Yang, Z.-P., Dong, X.-F., and Zhang, H.-B., (2019). Growth-Promoting Characteristics of Potential Nitrogen-Fixing Bacteria in the Root of an Invasive Plant Ageratina Adenophora. PeerJ, 7, e7099.