Journals / Türk Biyokimya Dergisi / 2015 / Cilt: 40 - Sayı: 1

Sarı kedi balığı Pelteobagrus fulvidraco karaciğer 6-fosfoglukonat dehidrojenaz (6PGD)'ın saflaştırılması ve kinetik özellikleri

Purification and kinetic characteristics of hepatic 6-phosphogluconate dehydrogenase (6PGD) from yellow catfish Pelteobagrus fulvidraco

Pages
15–23
Publication Date
2022-11-05
DOI
—
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

The IC50 values of Cd2+ and Cu2+ are 0.16, 0.41mM, respectively, but the Al3+ shows almost no effects on the enzymatic activity.Conclusion: The study can provide more information about puriŞcation and analysis of kinetic characterization of 6PGD in Şsh, and this is the Şrst time that we study the in vitro influence of metal ions on 6PGD activity in Şsh

📌 3 Key Takeaways

🎯
Objective & Hypothesis:To purify and characterize hepatic 6-phosphogluconate dehydrogenase (6PGD) from yellow catŞsh and evaluate the effect of several metal ions (Cd2+, Cu2+ and Al3+) on the enzymatic activity in vitro.Methods: The 2', 5'-ADP Sepharose 4B chromatography is used as the puriŞcation procedure; SDS-PAGE is used to assay the 6PGD purity and determine the molecular mass of the subunit; 6PGD activity is determined following rates of the conversion of NADP+ to NADPH at 340 nm.
📊
Key Findings & Data:The optimal temperature, pH and ionic strength is determined; The substrates and product kinetic, effect of metal ions are studied.Results: The speciŞc 6PGD activity is 5.75 U/mg, and its molecular weight is 50.1 kDa with a signal band.
💡
Conclusion & Impact:The IC50 values of Cd2+ and Cu2+ are 0.16, 0.41mM, respectively, but the Al3+ shows almost no effects on the enzymatic activity.Conclusion: The study can provide more information about puriŞcation and analysis of kinetic characterization of 6PGD in Şsh, and this is the Şrst time that we study the in vitro influence of metal ions on 6PGD activity in Şsh
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Domain Parameters

Abstract

To purify and characterize hepatic 6-phosphogluconate dehydrogenase (6PGD) from yellow catŞsh and evaluate the effect of several metal ions (Cd2+, Cu2+ and Al3+) on the enzymatic activity in vitro.Methods: The 2', 5'-ADP Sepharose 4B chromatography is used as the puriŞcation procedure; SDS-PAGE is used to assay the 6PGD purity and determine the molecular mass of the subunit; 6PGD activity is determined following rates of the conversion of NADP+ to NADPH at 340 nm. The optimal temperature, pH and ionic strength is determined; The substrates and product kinetic, effect of metal ions are studied.Results: The speciŞc 6PGD activity is 5.75 U/mg, and its molecular weight is 50.1 kDa with a signal band. The optimum pH, temperature and ionic strength for the enzyme are pH 7.85, 60°C and 100 mM, respectively. The enzyme has the activation energy of 17.37 kcal/mol. The Km values of the enzyme for 6PGA and NADP+ are 169.3 ?M and 91.1 ?M, respectively. The Vmax values of 6PGD with 6PGA and NADP+ as the substrate are 5.1096 U/mg and 6.6776 U/mg, respectively. 6PGD is inhibited by NADPH in a competitive manner with the Ki value of 41.5 ?M. The following metals, Cd2+, Cu2+ and Al3+ show inhibitory effects on the enzyme. Cd2+ shows inhibitory effects in a competitive manner. The IC50 values of Cd2+ and Cu2+ are 0.16, 0.41mM, respectively, but the Al3+ shows almost no effects on the enzymatic activity.Conclusion: The study can provide more information about puriŞcation and analysis of kinetic characterization of 6PGD in Şsh, and this is the Şrst time that we study the in vitro influence of metal ions on 6PGD activity in Şsh

Özet

Bu çalışmanın amacı, hepatik 6-fosfoglukonat dehidrojenazı (6PGD), sarı kedi balığından saflaştırmak ve karakterize etmektir. Bununla birlikte, farklı metal iyonlarının (Cd, Cu2+ ve Al3+) enzim üzerine olan etkilerini incelemektir.Metod: Saflaştırma için 2', 5'-ADP Sepharose 4B kromatograŞ prosedürü; 6PGD'nin saflığı ve moleküler ağırlığı için SDS-PAGE metodu; 6PGD aktivitesi ölçümü için NADP+'nın NADPH 340 nm'de ölçümü kullanılmıştır. Optimum ısı, pH ve iyonik güç bulunmuştur. Substratlar ve ürün kinetiği için metal iyonlarının etkisi çalışılmıştır.Bulgular: Özgül 6PGD aktivitesi, 5.75 U/mg, ve molekül ağırlığı, tek bir bant olarak 50.1 kDa bulunmuştur. Otimum pH, ısı ve iyonik güç, sırasıyla 7.85, 60°C and 100 mM olarak bulunmuştur. Enzimin aktivasyon enerjisi 17.37 kkal/mol'dür. 6PGA ve NADP+'nin Km değerleri sırasıyla, 169.3 ?M ve 91.1 ?M olarak ve Vmax değerleri sırasıyla 5.1096 U/mg ve 6.6776 U/mg olarak gösterilmiştir. 6PGD, NADPH tarafından 41.5 ?M Ki değeri ile kompetatif olarak inhibe edilmektedir. Cd2+, Cu2+ ve Al3+'un enzim üzerine inhibisyon etkileri gösterilmiştir. Enzimi Cd2+ kompetatif olarak inhibe etmektedir. Cd2+ ve Cu2+'ın IC50 değerleri sırasıyla 0.16, 0.41mM olarak bulunmuştur. Al'ün enzim aktivitesi üzerine bir etkisi gözlenmemiştir. Sonuç: Çalışma balık 6PGD'sinin saflaştırılması ve kinetic özelliklerinin incelenmesi bakımından daha içerikli bir bilgi sunmaktadır. Balık 6PGD'si üzerine in vitro şartlarda metal iyonlarının etkisinin incelendiği ilk çalışmadır

🔖

Cite This Article

HU, W., LUO, Z., SUN, L., ZHENG, J., CHEN, Q., ZHUO, M. (2022). Sarı kedi balığı Pelteobagrus fulvidraco karaciğer 6-fosfoglukonat dehidrojenaz (6PGD)'ın saflaştırılması ve kinetik özellikleri. Türk Biyokimya Dergisi, Cilt: 40 - Sayı: 1, 15–23. https://ajindex.com/articles/621114

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (12)

  1. Hanau S, Rippa M, Bertelli M, Dallocchio F, Barrett MP. 6-Phos- phogluconate dehydrogenase from Trypanosoma brucei. Kinetic analysis and inhibition by trypanocidal drugs. Eur J Biochem 1996; 240(3):592-9.
  2. Wamelink MM, Struys EA, Jakobs C. The biochemistry, metabo- lism and inherited defects of the pentose phosphate pathway: a review. J Inherit Metab Dis 2008; 31(6):703-17. Rosemeyer MA. The biochemistry of glucose-6-phosphate dehy- drogenase, 6-phosphogluconate dehydrogenase and glutathione reductase. Cell Biochem Funct 1987; 5(2):79-95.
  3. Tsai CS, Chen Q. PuriŞcation and kinetic characterization of 6-phosphogluconate dehydrogenase from Schizosaccharomyces pombe. Biochem Cell Biol 1998; 76(4):637-44.
  4. Beydemir S, Ciftci M, Yilmaz H, Kufrevioglu O. 6-phosphoglu- conate dehydrogenase: puriŞcation, characterization and kinetic properties from rat erythrocytes. Turk J Vet Anim Sci 2004; 28:707-14.
  5. Krepinsky K, Plaumann M, Martin W, Schnarrenberger C. Puri- Şcation and cloning of chloroplast 6-phosphogluconate dehydro- genase from spinach. Cyanobacterial genes for chloroplast and cytosolic isoenzymes encoded in eukaryotic chromosomes. Eur J Biochem 2001; 268(9):2678-86.
  6. Pearse BM, Rosemeyer MA. Human 6-phosphogluconate dehy- drogenase. PuriŞcation of the erythrocyte enzyme and the influ- ence of ions and NADPH on its activity. Eur J Biochem 1974; 42(1):213-23.
  7. Toews ML, Kanji MI, Carper WR. 6-Phosphogluconate de- hydrogenase. PuriŞcation and kinetics. J Biol Chem 1976; 251(22):7127-31.
  8. Villet RH, Dalziel K. PuriŞcation and properties of 6-phospho- gluconate dehydrogenase from sheep liver. Biochem J 1969; 115(4):639-43.
  9. Ceyhan D, Danişan A, Oğüş IH, Ozer N. PuriŞcation and kinetic properties of 6-phosphogluconate dehydrogenase from rat small intestine. Protein J 2005; 24(5):293-301.
  10. Cottreau D, Boivin P, Kahn A, Milani A, Marie J. Human granulo- cyte 6 phosphogluconate dehydrogenase. PuriŞcation by elective elution with NADP+, immunological and kinetic properties. Bio- chimie 1975; 57(3):325-35.
  11. Price NE, Cook PF. Kinetic and chemical mechanisms of the sheep liver 6-phosphogluconate dehydrogenase. Arch Biochem Biophys 1996; 336(2):215-23.
  12. Procsal D, Holten D. PuriŞcation and properties of rat liver 2000; 267(12):3442-52. CEPB (Chinese Environment Protection Bureau). Water quality standards for Şsheries 1989; (GB11607-89). Tan XY, Luo Z, Zhang GY, Liu XJ, Jiang M. Effect of dietary cadmium level on the growth, body composition and several he- patic enzymatic activit