Journals / Kafkas Journal of Medical Sciences / 2026 / Cilt: 16 Sayı: 2

Investigation of Respiratory Tract Agents with Multiplex PCR in Children with Upper Respiratory Tract Symptoms

Gizem Tükenmez(Department of Pediatrics, Faculty of Medicine, Kafkas University, Kars, Türkiye)
Murat Karameşe(Department of Medical Microbiology, Faculty of Medicine, Kafkas University, Kars, Türkiye)
Pages
137–142
Publication Date
2026-08-06
DOI
—
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Our findings indicate that appropriate antibiotic use and seasonal surveillance are essential in managing pediatric URTIs.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Objective: The aim of this study was to detect respiratory infection pathogens in pediatric patients aged 0–18 years presenting with upper respiratory tract symptoms using the multiplex polymerase chain reaction (PCR) method, to analyze their seasonal distribution, and to evaluate their clinical characteristics.
📊
Key Findings & Data:Materials and Methods: This retrospective study was conducted through the analysis of PCR test results in 594 pediatric patients presenting to a university hospital in Kars, Türkiye, with symptoms of upper respiratory tract infection.
💡
Conclusion & Impact:Our findings indicate that appropriate antibiotic use and seasonal surveillance are essential in managing pediatric URTIs.
🔬Design:Araştırma Makalesi
📍Scope:Comprehensive Sample
⚙️Variables:pediatrics · upper respiratory tract infections · multiplex PCR

Abstract

Objective: The aim of this study was to detect respiratory infection pathogens in pediatric patients aged 0–18 years presenting with upper respiratory tract symptoms using the multiplex polymerase chain reaction (PCR) method, to analyze their seasonal distribution, and to evaluate their clinical characteristics. Materials and Methods: This retrospective study was conducted through the analysis of PCR test results in 594 pediatric patients presenting to a university hospital in Kars, Türkiye, with symptoms of upper respiratory tract infection. The respiratory PCR panel included seven pathogens: Influenza A/B, RSV, SARS-CoV-2, Adenovirus, Rhinovirus, and Streptococcus pyogenes. Data were analyzed using SPSS v20. Results: At least one respiratory pathogen was detected in 44.8% of patients. The most frequently identified pathogens were Influenza B (17.2%) and Rhinovirus (7.9%). RSV positivity was found in 4.4% of cases, and 42.3% of RSV-positive patients required hospitalization. Seasonally, RSV and Influenza A infections were more common in winter, while Rhinovirus and Adenovirus were more frequently observed during spring and summer. The co-infection rate was 9.4%, with the most common combination being RSV and Influenza B. Conclusion: Molecular diagnostic methods play a crucial role in the early and accurate identification of respiratory pathogens. Pathogens such as RSV may lead to more severe clinical courses, while the monitoring of widespread agents like Influenza B is critical for outbreak management. Our findings indicate that appropriate antibiotic use and seasonal surveillance are essential in managing pediatric URTIs.

🔖

Cite This Article

Tükenmez, G., Karameşe, M. (2026). Investigation of Respiratory Tract Agents with Multiplex PCR in Children with Upper Respiratory Tract Symptoms. Kafkas Journal of Medical Sciences, Cilt: 16 Sayı: 2, 137–142. https://ajindex.com/articles/1631461

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (20)

  1. Brittain-Long R, Nord S, Olofsson S, Westin J, Anderson LM, Lindh M. Multiplex real-time PCR for detection of respiratory tract infections. J Clin Virol. 2008;41(1):53–6. https://doi.org/10.1016/j.jcv.2007.10.029
  2. Hall CB, Weinberg GA, Iwane MK, Blumkin AK, Edwards KM, Staat MA, et al. The burden of respiratory syncytial virus infection in young children. N Engl J Med. 2009;360(6):588–98. https://doi.org/10.1056/NEJMoa0804877
  3. Shi T, McAllister DA, O’Brien KL, Simoes EA, Madhi SA, Gessner BD, et al. Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study. Lancet. 2017;390(10098):946–958. https://doi.org/10.1016/S0140-6736(17)30938-8
  4. Nair H, Nokes DJ, Gessner BD, Dherani M, Madhi SA, Singleton RJ, et al. Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis. Lancet. 2010;375(9725):1545–1555. https://doi.org/10.1016/S0140-6736(10)60206-1
  5. Papenburg J, Hamelin MÈ, Ouhoummane N, Carbonneau J, Ouakki M, Raymond F, et al. Comparison of risk factors for human metapneumovirus and respiratory syncytial virus disease severity in young children. J Infect Dis. 2012;206(2):178–189. https://doi.org/10.1093/infdis/jis333
  6. Glezen WP, Couch RB, MacLean RA, Payne A, Baird JN, Vallbona C, et al. Interpandemic influenza in the Houston area, 1974–76. N Engl J Med. 1978;298(11):587-592. https://doi.org/10.1056/nejm197803162981103
  7. Iwane MK, Edwards KM, Szilagyi PG, Walker FJ, Griffin MR, Weinberg GA, et al. Population-based surveillance for hospitalizations associated with respiratory syncytial virus, influenza virus, and parainfluenza viruses among young children. Pediatrics. 2004;113(6):1758–1764. https://doi.org/10.1542/peds.113.6.1758
  8. Goka EA, Vallely PJ, Mutton KJ, Klapper PE. Single and multiple respiratory virus infections and severity of respiratory disease: a systematic review. Paediatr Respir Rev. 2014;15(4):363–370. https://doi.org/10.1016/j.prrv.2013.11.001
  9. Simultaneous Detection of Fourteen Respiratory Viruses in Clinical Specimens by Two Multiplex Reverse Transcription Nested-PCR Assays. J Med Virol. 2004;72(3):484–95. https://doi.org/10.1002/jmv.20008
  10. Şirin MC. Isparta ilinde akut solunum yolu enfeksiyonu ön tanısı olan hastalarda multipleks PCR yöntemiyle viral ve bakteriyel etkenlerin sıklığının araştırılması. Med J SDU. 2022;29(2):171–178. https://doi.org/10.17343/sdutfd.990103
  11. Aygün D, Erbek F, Kuşkucu M, Şener D, Köşker M, Varol F, et al. The epidemiologic and clinical features of viral agents among hospitalized children with lower respiratory tract infections. Turk Pediatri Ars. 2020;55(2):166–173. https://doi.org/10.14744/TurkPediatriArs.2020.39114
  12. Şık G, Demirbuğa A, Annayev A, Cabiri A, Deliceo E, Çıtak A. Viral infections among patients with acute lower respiratory tract infections in the pediatric intensive care unit. J Pediatr Inf. 2020;14(1):e27-e32. https://doi.org/10.5578/ced.69290
  13. Tabatabai J, Ihling CM, Manuel B, Rehbein RM, Schnee SV, Hoos J, et al. Viral etiology and clinical characteristics of acute respiratory tract infections in hospitalized children in Southern Germany (2014-2018). Open Forum Infect Dis. 2023;10(3): ofad110. https://doi.org/10.1093/ofid/ofad110
  14. Zhao Q, Ke P, Hu L, Jiang C, Su R, Lv W, et al. Epidemiological characteristics of upper respiratory tract pathogens in children in Guangdong, China. Clin Respir J. 2024;18(10):e70011. https://doi.org/10.1111/crj.70011
  15. Wu Y, Zhou J, Shu T, Li W, Shang S, Du L. Epidemiological study of post-pandemic pediatric common respiratory pathogens using multiplex detection. Virol J. 2024;21(1):168. https://doi.org/10.1186/s12985-024-02441-8
  16. Aydın E, Yılmaz GG, Aydın N, Dicle Y, Perçin Renders D. COVID-19 pandemisinden sonra solunum patojenlerinin dağılımı: Türkiye’den tek merkezli bir pediatrik çalışma. Kafkas J Med Sci. 2023;13(3):321–8. https://doi.org/10.5505/kjms.2023.37605
  17. Silva PAN, Ito CRM, Moreira ALE, Santos MO, Barbosa LCG, Wastowski IJ, et al. Influenza and other respiratory viruses in children: prevalence and clinical features. Eur J Clin Microbiol Infect Dis. 2022;41(12):1445-1449. https://doi.org/10.1007/s10096-022-04515-3
  18. Clark TW, Lindsley K, Wigmosta TB, Bhagat A, Hemmert RB, Uyei J, et al. Rapid multiplex PCR for respiratory viruses reduces time to result and improves clinical care: results of a systematic review and meta-analysis. J Infect. 2023;86(5):462-475. https://doi.org/10.1016/j.jinf.2023.03.005
  19. Gao Y, Feng X, Yuan T, Li M, Wei M, Li S. Post-pandemic trends: Epidemiological and etiological insights into acute respiratory infections in southern China. Diagn Microbiol Infect Dis. 2024;109(3):116293. https://doi.org/10.1016/j.diagmicrobio.2024.116293
  20. Jartti T, Söderlund-Venermo M, Hedman K, Ruuskanen O, Mäkelä MJ. New molecular virus detection methods and their clinical value in lower respiratory tract infections in children. Paediatr Respir Rev. 2013;14(1):38-45. https://doi.org/10.1016/j.prrv.2012.04.002