Dergiler / Turkish Journal of Zoology / 2018 / Cilt: 42 - Sayı: 1

A comprehensive phylogenetic analysis of Grapsoidea crabs (Decapoda: Brachyura) based on mitochondrial cytochrome oxidase subunit 1 (CO1) genes

Sayfa
46–52
Yayın Tarihi
2022-11-05
DOI
—
🏛️Bu makalenin bibliyografik verileri ve tam metin bağlantısı DergiPark üzerinden sağlanmıştır.
DergiPark Kaydı ↗
✨

Yapay Zeka Hızlı Bakış & Çıkarımlar

AI Insight
⚡ TL;DR(1 Cümlede Hızlı Çıkarım)

The results revealed that Varunidae should be monophyletic and Sesarmidae should be paraphyletic.

📌 3 Maddede Bu Makale

🎯
Amaç & Hipotez:The sequences of mitochondrial cytochrome c oxidase subunit I (CO1) genes of eight species crabs of Grapsoidea were determined and analyzed in this paper.
📊
Temel Bulgular & Veri:In this study, we conducted the first exploration of evolutionary relationships among species based on analysis of the molecular data of CO1 genes of eight species (Sesarmops sinensis, Clistocoeloma sinensis, Perisesarma bidens, Helice latimera, Helice tientsinensis, Helice wuana, Hemigrapsus sanguineus,and Varuna litterata).
💡
Sonuç & Katkı:The results revealed that Varunidae should be monophyletic and Sesarmidae should be paraphyletic.
🔬Tür:Araştırma Makalesi
📍Kapsam:Genişletilmiş Akademik Örneklem
⚙️Değişkenler:Alan Parametreleri

Abstract

The sequences of mitochondrial cytochrome c oxidase subunit I (CO1) genes of eight species crabs of Grapsoidea were determined and analyzed in this paper. The traditional classification is that Grapsidae contains four subfamilies comprising Grapsinae, Varuninae, Sesarminae, and Plagusiinae, which are also treated as families in some studies. There is a lack of clarity in the classification of some species, such as Eriocheir species. In this study, we conducted the first exploration of evolutionary relationships among species based on analysis of the molecular data of CO1 genes of eight species (Sesarmops sinensis, Clistocoeloma sinensis, Perisesarma bidens, Helice latimera, Helice tientsinensis, Helice wuana, Hemigrapsus sanguineus,and Varuna litterata). We provide a detailed and comprehensive view of the phylogenetic relationships of the Grapsoidea species determined by maximum likelihood and Bayesian inference analyses. The results show that S. sinensis, C. sinensis,and P. bidens are part of Sesarmidae, Grapsoidea, while H. latimera, H. tientsinensis, H. wuana, H. sanguineus,and V. litterata belong to Varunidae, Grapsoidea. The results revealed that Varunidae should be monophyletic and Sesarmidae should be paraphyletic.

🔖

Bu Makaleye Atıf Yap

LIU, Y., TANG, B., ZHOU, C., XIN, Z., LIU, Q. (2022). A comprehensive phylogenetic analysis of Grapsoidea crabs (Decapoda: Brachyura) based on mitochondrial cytochrome oxidase subunit 1 (CO1) genes. Turkish Journal of Zoology, Cilt: 42 - Sayı: 1, 46–52. https://ajindex.com/articles/616127

📄 Tam Metin PDF Okuyucu

📄

PDF görüntüleyici hazırlanıyor...

Kaynakça (13)

  1. Brossi-Garcia AL, Rodrigues MD (1997). Zoeal morphology of Pachygrapsus transversus (Gibbes) (Decapoda, Grapsidae) reared in the laboratory. Rev Bras Zool 14: 803-819.
  2. Castresana J (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17: 540-552.
  3. Chu KH, Ho HY, Li CP, Chan TY (2003). Molecular phylogenetics of the mitten crab species in Eriocheir, sensu lato (Brachyura: Grapsidae). J Crustacean Biol 23: 738-746.
  4. Cuesta JA, Schubart CD (1999). First zoeal stages of Geograpsus lividus and Goniopsis pulchra from Panama confirm consistent larval characters for the subfamily Grapsinae (Crustacea: Brachyura: Grapsidae). Ophelia 51: 163-176.
  5. Cui BK, Tang LP, Dai YC (2011). Morphological and molecular evidences for a new species of Lignosus (Polyporales, Basidiomycota) from tropical China. Mycol Prog 10: 267-271.
  6. De Grave S, Pentcheff ND, Ahyong ST, Chan TY, Crandall KA, Dworschak PC, Felder DL, Feldmann RM, Fransen CHJM, Goulding LYD et al. (2009). A classification of living and fossil genera of decapod crustaceans. Raffles B Zool 21: 1-109.
  7. Guinot D (1978). Principes d’une classification évolutive des Crustacés Décapodes Brachyoures. Bulletin Biologique de la France et de la Belgique 112: 211-292.
  8. Ji YK, Wang A, Lu XL, Song DH, Jin YH, Lu JJ, Sun HY (2014). Mitochondrial genomes of two brachyuran crabs (Crustacea: Decapoda) and phylogenetic analysis. J Crustacean Biol 34: 494-503.
  9. Karasawa H, Kato H (2001). The systematic status of the genus Miosesarma Karasawa, 1989 with a phylogenetic analysis within the family Grapsidae and a review of fossil records (Crustacea: Decapoda: Brachyura). Paleontol Res 5: 259-275.
  10. Katoh K, Misawa K, Kuma K, Miyata T (2002). MAFFT a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30: 3059-3066.
  11. Katoh K, Standley DM (2013). MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30: 772-780.
  12. Liu QN, Zhang HB, Jiang SH, Xuan FJ, Li CF, Zhang DZ, Zhou CL, Tang BP (2015). The complete mitochondrial genome of Eriocheir japonica sinensis (Decapoda Varunidae) and its phylogenetic analysis. Biochem Syst Ecol 62: 241-248.
  13. Ma HY, Ma CY, Li CH, Lu JX, Zou X, Gong YY, Wang W, Chen W, Ma LB, Xia LJ (2015). First mitochondrial genome for the red crab (Charybdis feriata) with implication of phylogenomics and population genetics. Sci Rep 5: 11524. McDermott JJ (1998). The weste