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Dergiler / Gazi University Journal of Science Part A: Engineering and Innovation / 2022 / Cilt: 9 - Sayı: 3

In silico Analyzes of miRNAs Associated with Root and Tuber in S. commersonii

Aysel Özgül KORAL
Mine TÜRKTAŞ
Sayfa
251–258
Yayın Tarihi
2022-10-19
DOI
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⚡ TL;DR(1 Cümlede Hızlı Çıkarım)

A number of miRNAs were identified, and their potential roles in tuber were discussed.

📌 3 Maddede Bu Makale

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Amaç & Hipotez:Potato is an industrial plant that is produced and consumed globally due to its cheapness, high yield in the unit area, high nutritional values.
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Temel Bulgular & Veri:It has been stated that wild species with various characteristics can be used in studies to increase productivity because they have greater rate of genetic variation than their domesticated relatives.
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Sonuç & Katkı:A number of miRNAs were identified, and their potential roles in tuber were discussed.
🔬Tür:Araştırma Makalesi
📍Kapsam:Genişletilmiş Akademik Örneklem
⚙️Değişkenler:Bioinformatics · miRNA · Root

Abstract

Potato is an industrial plant that is produced and consumed globally due to its cheapness, high yield in the unit area, high nutritional values. It is used in many different fields. It has been stated that wild species with various characteristics can be used in studies to increase productivity because they have greater rate of genetic variation than their domesticated relatives. One of the wild species of potato found in nature is S. commersonii Dunal. It is more resistant to many stresses than cultivated potato S. tuberosum L. Also, its tuber has better quality due to the fact that it contains a higher proportion of dry matter. With the aim of determining the effects of miRNAs in tuber production and root characteristics relation we aimed to detect miRNAs in two transcriptome libraries of S. commersonii. In this study miRNAs were evaluated for the first time in the wild potato transcriptome data using in silico analysis. A number of miRNAs were identified, and their potential roles in tuber were discussed.

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Bu Makaleye Atıf Yap

KORAL, A. Ö., TÜRKTAŞ, M. (2022). In silico Analyzes of miRNAs Associated with Root and Tuber in S. commersonii. Gazi University Journal of Science Part A: Engineering and Innovation, Cilt: 9 - Sayı: 3, 251–258. https://ajindex.com/articles/520008

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Kaynakça (3)

  1. Ahmadi, S. H., Agharezaee, M., Kamgar-Haghighi, A. A., & Sepaskhah, A. R. (2017). Compatibility of root growth and tuber production of potato cultivars with dynamic and static water-saving irrigation managements. Soil Use and Management, 33(1), 106-119. doi:10.1111/sum.12317 Aversano, R., Contaldi, F., Ercolano, M. R., Grosso, V., Iorizzo, M., Tatino, F., Xumerle, L., Molin, A. D., Avanzato, C., Ferrarini, A., Delledonne, M., Sanseverino, W., Cigliano, R. A., Capella-Gutierrez, S., Gabaldón, T., Frusciante, L., Bradeen, J. M., & Carputo, D. (2015). The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potato relatives. The Plant Cell, 27(4), 954-968. doi:10.1105/tpc.114.135954 Chapman, H. W. (1958). Tuberization in the Potato Plant. Physiologia Plantarum, 11, 215-224. doi:10.1111/j.1399-3054.1958.tb08460.x Cheng, H.-Y., Wang, Y., Tao, X., Fan, Y.-F., Dai, Y., Yang, H., & Ma, X.-R. (2016). Genomic Profiling of Exogenous Abscisic Acid-Responsive MicroRNAs in Tomato (Solanum lycopersicum). BMC Genomics, 17(1), 423. doi:10.1186/s12864-016-2591-8
  2. Chi, M., Liu, C., Su, Y., Tong, Y., & Liu, H. (2015). Bioinformatic Prediction of Upstream MicroRNAs of PPO and Novel MicroRNAs in Potato. Canadian Journal of Plant Science, 95(5), 871-877. doi:10.4141/cjps-2014-308 de Oliveira, A. S., Boiteux, L. S., Kormelink, R., & Resende, R. O. (2018). The Sw-5 Gene Cluster: Tomato Breeding and Research Toward Orthotospovirus Disease Control. Frontiers in Plant Science, 9, 1055. doi:10.3389/fpls.2018.01055 Dilsiz, S., & Yorgancılar, M. (2018). Patates (Solanum Tuberosum L.) Bitkisinde Sakkaroz ve Oksin-Sitokinin Uygulamalarının Mikro Yumru Oluşumuna Etkileri. Selçuk Tarım ve Gıda Bilimleri Dergisi, 32(3), 274-281. doi:10.15316/SJAFS.2018.94 Fujii, H., Chinnusamy, V., Rodrigues, A., Rubio, S., Antoni, R., Park, S.-Y., Cutler, S. R., Sheen, J., Rodriguez, P. L., & Zhu, J.-K. (2009). In vitro Reconstitution of an Abscisic acid Signalling Pathway. Nature, 462, 660-664. doi:10.1038/nature08599 Hajjar, R., & Hodgkin, T. (2007). The Use of Wild Relatives in Crop Improvement: A Survey Of Developments over The Last 20 Years. Euphytica, 156(1-2), 1-13. doi:10.1007/s10681-007-9363-0
  3. Hanneman, R. E. Jr., & Bamberg, J. B. (1986). Inventory of Tuber-Bearing Solanum Species. Bulletin 533 of Research Division of the College of Agriculture and Life Sciences, University of Wisconsin, Madison USA. Johnson, K. L., Cassin, A. M., Lo