Dergiler / Turkish Journal of Gastroenterology / 2017 / Cilt: 28 - Sayı: 4

Extracellular matrix protein 1 gene rs3737240 single nucleotide polymorphism is associated with ulcerative colitis in Turkish patients

Sayfa
254–259
DOI
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No relation was found between rs3737240 SNP genotype and the phenotypical characteristics of UC patients.Conclusion: The TT genotype of ECM1 gene rs3737240 SNP significantly increased susceptibility for UC and azathioprine use in UC patients in a Turkish population

📌 3 Maddede Bu Makale

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Amaç & Hipotez:Background/Aims: Ulcerative colitis (UC) and Crohn’s disease are chronic inflammatory diseases.
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Temel Bulgular & Veri:Extracellular matrix protein 1 (ECM1), a gene related to mucosal barrier function, has been shown to be associated with UC.
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Sonuç & Katkı:No relation was found between rs3737240 SNP genotype and the phenotypical characteristics of UC patients.Conclusion: The TT genotype of ECM1 gene rs3737240 SNP significantly increased susceptibility for UC and azathioprine use in UC patients in a Turkish population
🔬Tür:Araştırma Makalesi
📍Kapsam:Genişletilmiş Akademik Örneklem
⚙️Değişkenler:Alan Parametreleri

Özet

Background/Aims: Ulcerative colitis (UC) and Crohn’s disease are chronic inflammatory diseases. Genetic, immunologic, and microbial factors play an important role in their pathogenesis. Extracellular matrix protein 1 (ECM1), a gene related to mucosal barrier function, has been shown to be associated with UC. This study aims to determine the relationship between ECM1 gene rs3737240 single nucleotide polymorphism (SNP) and UC in a group of Turkish patients.Materials and Methods: Ninety-four UC patients and 120 healthy controls were enrolled in the study. ECM1 gene rs3737240 SNP genotyping was performed using the polymerase chain reaction-restriction fragment length polymorphism method.Results: TT genotype was significantly more common in UC patients than in the healthy control group [p=0.034; odds ratio (OR) 2.34; 95% confidence interval (CI) 1.04-5.25]. The presence of C allele significantly lowered the UC risk (p=0.034; OR 0.42; 95% CI 0.19-0.95). TT genotype was significantly associated with azathioprine use in UC patients (p=0.037; OR 3.0; 95% CI 1.04-8.65). The C allele significantly reduced the probability of azathioprine use in UC patients (p=0.037; OR 0.33 CI 95% 0.11-0.96). No relation was found between rs3737240 SNP genotype and the phenotypical characteristics of UC patients.Conclusion: The TT genotype of ECM1 gene rs3737240 SNP significantly increased susceptibility for UC and azathioprine use in UC patients in a Turkish population

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Bu Makaleye Atıf Yap

ADALI, G., TUNALI, N. E., YORULMAZ, E., TİRYAKİOĞLU, N. O., MUNGAN, S. G., ULAŞOĞLU, C., ENÇ, F. Y., TUNCER, İ. (2017). Extracellular matrix protein 1 gene rs3737240 single nucleotide polymorphism is associated with ulcerative colitis in Turkish patients. Turkish Journal of Gastroenterology, Cilt: 28 - Sayı: 4, 254–259. https://ajindex.com/articles/411306

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Kaynakça (14)

  1. Baumgart DC, Carding SR. Inflammatory bowel disease: cause and immunobiology. The Lancet 2007; 369: 1627-40
  2. McGovern D, Kugathasan S, Cho JH. Genetics of inflammatory bowel diseases. Gastroenterology 2015; 149: 1163-76
  3. McCole DF. IBD Candidate genes and intestinal barrier regulation. Inflamm Bowel Dis 2014; 20: 1829-49
  4. Sercu S, Zhang M, Oyama N, et al. Interaction of extracellular matrix protein 1 with extracellular matrix components: ECM1 is a basement membrane protein of the skin. J Invest Dermatol 2008; 128: 1397-408
  5. Fisher SA, Tremelling M, Anderson CA, et al. Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease. Nat Genet 2008; 40: 710-2
  6. Anderson CA, Massey DCO, Barrett JC, et al. Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationship. Gastroenterology 2009; 136: 523-9
  7. Fujimoto N, Terlizzi J, Aho S, et al. Extracellular matrix protein 1 inhibits the activity of matrix metalloproteinase 9 through high-affinity protein/protein interactions. Exp Dermatol 2006; 15: 300-7
  8. Garg P, Vijay-Kumar M, Wang L, Gewirtz AT, Merlin D, Sitaraman SV. Matrix metalloproteinase-9-mediated tissue injury overrides the protective effect of matrix metalloproteinase-2 during colitis. Am J Physiol Gastrointest Liver Physiol 2009; 296: 175-84
  9. Wang L, Yu J, Ni J, et al. Extracellular matrix protein 1 (ECM1) is over-expressed in malignant epithelial tumors. Cancer Lett 2003; 200: 57-67
  10. Burton PR, Clayton DG, Cardon LR, et al. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 2007; 447: 661-78
  11. Festen EA, Stokkers PC, van Diemen CC, et al. Genetic analysis in a Dutch study sample identifies more ulcerative colitis susceptibility loci and shows their additive role in disease risk. Am J Gastroenterol 2009; 105: 395-402
  12. Gearry RB, Glubb DM, Hollis-Moffatt JE, et al. Australian Gastroenterology Week 2010. 2010 October 20-23; Queensland, Australia. Inflammatory Bowel Disease, Basic. J Gastroenterol Hepatol 2010; 25: 80-4
  13. Shi J, Zhou L, Zhernakova A, et al. Haplotype-based analysis of ulcerative colitis risk loci identifies both IL2 and IL21 as susceptibility genes in Han Chinese. Inflamm Bowel Dis 2011; 17: 2472-9
  14. Plevy S, Silverberg MS, Lockton S, et al. Combined serological, genetic, and inflammatory markers differentiate non-IBD, Crohn's disease, and ulcerative