Journals / Türk Tarım - Gıda Bilim ve Teknoloji dergisi / 2021 / Cilt: 9 - Sayı: 10

Molecular Phylogenetic Analysis of Vicia L. (Fabaceae) Taxa Growing in the Southeastern Anatolia Region of Turkey: Based on Internal Transcribed Spacer (ITS)

Pages
1831–1839
Publication Date
2022-11-06
DOI
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AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

The species-specific markers developed in this study are useful for early detection of targeted Vicia taxa and can act as a guide to the basic data required for the evolution of systematic breeding and conservation strategies, as well as for germplasm resources

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Leguminosae or Fabaceae is the third-largest flowering plant family and is important in terms of both food production and soil fertility.
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Key Findings & Data:Wild Vicia species and the genetic diversity of the Southeastern Anatolia Region provide an invaluable resource for the improvement of cultivated temperate feed and legume crops.
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Conclusion & Impact:The species-specific markers developed in this study are useful for early detection of targeted Vicia taxa and can act as a guide to the basic data required for the evolution of systematic breeding and conservation strategies, as well as for germplasm resources
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Domain Parameters

Abstract

Leguminosae or Fabaceae is the third-largest flowering plant family and is important in terms of both food production and soil fertility. Wild Vicia species and the genetic diversity of the Southeastern Anatolia Region provide an invaluable resource for the improvement of cultivated temperate feed and legume crops. The rapid progress of technology in recent years has nowmade it possible to use modern techniques in phylogenetic studies and to examine plants in a greater detail using biochemical, cytological and molecular methods to supplement purely systematic studies. The use of molecular phylogenetic analysis is the most attractive alternative strategy for a more accurate identification of the species of the Vicia genus. In the current study, some Vicia L. taxa growing naturally in the Southeastern Anatolia Region were investigated using molecular phylogenetic analysis. Internal transcribed spacers (ITS) of nuclear ribosomal DNA were sequenced in order to study the phylogenetic relationships of Vicia L. taxa. Lathyrus inconspicuous L. and Lathyrus cassius Boiss. were used as an outgroup. The ITS area was determined to be approximately 479- 672 bp. The ITS sequences were submitted to the NCBI database and accession numbers obtained. The resulting tree clearly groups and separates the sect. Narbonensis, Ervilia, Peregrinae, Lathyroides, Vicia and Cracca species but was less able to distinguish species from sect. Hypechusa and Lentopsis. The data acquired were observed to be reliable in terms of solving the taxonomical problems of the Vicia L. taxa. The morphological distinctions are greatly supported by DNA sequence studies. The species-specific markers developed in this study are useful for early detection of targeted Vicia taxa and can act as a guide to the basic data required for the evolution of systematic breeding and conservation strategies, as well as for germplasm resources

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Cite This Article

Kaplan, A., Ertekin, A. S., Gündüzer, E. (2022). Molecular Phylogenetic Analysis of Vicia L. (Fabaceae) Taxa Growing in the Southeastern Anatolia Region of Turkey: Based on Internal Transcribed Spacer (ITS). Türk Tarım - Gıda Bilim ve Teknoloji dergisi, Cilt: 9 - Sayı: 10, 1831–1839. https://ajindex.com/articles/642698

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References (10)

  1. Aceto S, Caputo P, Cozzolino S, Gaudio L. and Moretti A. 1999. Phylogeny and Evolution of Orchis and Allied Genera Based on ITS DNA Variation: Morphological Gaps and Molecular Continuity, Mol Phylo and Evol., 13 (1): 67-76.
  2. Baldwin BG, Sanderson MJ, Porter JM, Wojcıechowoski MF, Campell CS and Donoghue MJ. 1995. The ITS Region of Nuclear Ribosomal DNA: A Valuable Source of Evidence on Angiosperm Phylogeny, Annals of the Missouri Botanical Garden, 250-272.
  3. Başbağ M, Hoşgören H, Aydın A. 2013.
  4. Vicia Taxa in the Flora of Turkey, Anadolu J. Agr. Sci., 28(1):59-66. Binzat OK. 2012. Revision of Vicia L. (Leguminosae) in Central Anatolia, Turkey. Ph.D. Thesis, Middle East Technical University, Institute of Natural and Applied Sciences, September, Ankara.
  5. Bryant JA, Hughes SG. 2011.
  6. Vicia, Chapter 14, C.kole (ed.). Wild Crop Relatives: Genomic and Breeding Resources, Legume Crops and Forages, Spriger verlag, Heidelberg. Caputo P, Frediani M, Venora G, Ravalli C, Ambrosio M and Cremonini R. 2006. Nuclear DNA contents, rDNAs and karyotypes evolution in subgenus Vicia: III. Heterogeneous section Hypechusa, Protoplasma, 228: 167- 177. Castiglione MR, Frediani M, Gelati MT, Ravalli C, Venora G, Caputo P and Cremonini R. 2007. Cytological and molecular characterization of Vicia esdraelonensis Warb. & Eig: a rare taxon, Protoplasma, 231: 151- 159. Davis PH. 1970. Vicia L. In: Flora of Turkey and the East Aegean Islands, Vol.3 (ed. Davis, P.H). p. 274-325.
  7. Edinburgh University Press,
  8. Edinburgh. El-Shanshoury AR, Soliman SA. 1996. Electrophoretic Evidence for Subgeneric and Sectional Relationships of Some Species in Vicia L., Pak J Bot., 28: (2) 173-182. Emre İ. 2011. Determination of Genetic Diversity in the Vicia L. (section Vicia) by Using SDS-PAGE, Pak J Bot., 43(3): 1429- 1432. Enneking D, Maxted N. 1995. Narbon bean (Vicia narbonensis L.). Evolution of Crop Plants, 2nd ed. Smartt, J., Simmonds, N. W., Longman: London, p. 316-321.
  9. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap, Evolution., 39: 783- 791. 242. Fennel SR, Powell W, Wright F, Ramsay G. and Waugh R. 1998. Phylogenetic relationships between Vicia faba (Fabaceae) and related species inferred from chloroplast trnL sequences, Pl Syst Evol., 212:247- 259. Foladi FZ, Salimpour F, Sharifnia F, Ghanavati F. 2013. Phylogenetic study of tribe Vicieae based on Internal Transcribed Spacer (ITS), Ann of Biol Res., 4 (1):75-79. Freeman S. and Herron JC. 1999.
  10. Evrimsel Analiz, Çıp