Journals / Genel Tıp Dergisi / 2004 / Cilt: 14 - Sayı: 1

Detection of whole hepatitis B virus genom with polymerase chain reaction

Tam büyüklükteki hepatitis B virüs genomunun polimeraz zincir reaksiyonuyla gösterilmesi

Pages
19–22
DOI
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AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Results and conclusion: Enzyme digestion assay indicated that the PCR products belong to HBV genome.

📌 3 Key Takeaways

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Objective & Hypothesis:Objective: Current knowledge of hepatitis B virüs (HBV) is based on either amplified subgenomic HBV fragments or whole HBV genomes.
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Key Findings & Data:HBV can not be proliferate in cell culture.
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Conclusion & Impact:Results and conclusion: Enzyme digestion assay indicated that the PCR products belong to HBV genome.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Polimeraz zincir reaksiyonu · Hepatit B · Hepatit B virüsü

Abstract

Objective: Current knowledge of hepatitis B virüs (HBV) is based on either amplified subgenomic HBV fragments or whole HBV genomes. HBV can not be proliferate in cell culture. However, whole HBV genome placed into cloning vector proliferates in the celi culture at low level titreş and allows us to research on the HBV genome. Methods: Fifteenth chronic hepatitis B patients included in this study. Whole HBV genome 3200 base pair in length was amplified by polymerase chain reaction (PCR) in 9 patients. Results and conclusion: Enzyme digestion assay indicated that the PCR products belong to HBV genome.

Özet

Amaç: Hepatitis B virüsü (HBV) hakkındaki çalışmalar polimeraz zincir reaksiyonuyla (PZR) çoğaltılan subgenomik ya da tam uzunluktaki HBV genomu kullanılarak yapılmaktadır. Hepatitis B virüsü hücre kültürferinde üretilememektedir. Tam uzunluktaki HBV genomu klonlama vektörlerine yerleştirilerek düşük litrede olsa bile-hücre kültürlerinde üretilebilmekte ve aynı zamanda HBV genomu üzerinde çalışmalar yapılabilmektedir. Yöntem: Bu çalışmada 15 kronik hepatitis B hastası çalışma kapsamına alınmış ve 9 hastanın 3200 baz çifti uzunluğundaki HBV genomunun PZR ile çoğaltılması optimize edilmiştir. Bulgular ve sonuç: Enzim kesim deneyi yapılarak çoğaltılan PZR ürünlerinin HBV genomuna ait olduğu tespit edilmiştir.

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Cite This Article

ÖZDARENDELİ, A. (2004). Detection of whole hepatitis B virus genom with polymerase chain reaction. Genel Tıp Dergisi, Cilt: 14 - Sayı: 1, 19–22. https://ajindex.com/articles/224992

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References (13)

  1. Thomas HC, Thurz MR. Pathogenesis of chronic hepatitis B. In: Zuckerman AJ, Thomas HC, editors. Viral hepatitis. 2nd ed. London: Churchill Livingstone; 1998. pp 217-26
  2. Raimondo G, Burk RD, Lieberman HM, Muschel J, Hadziyannis SJ, Will H, et al. Interrupted replication of hepatitis B virus in liver tissue of HBsAg-carriers with hepatocellular carcinoma. Virology 1988;166:103-12
  3. Takahashi K, Akahane Y, Hino K, Ohta MS. Hepatitis B virus genomic sequence in the circulation of hepatocellular carcinoma patients: Comparative analysis of 40 full-length isolates. Arch Virol 1998;143:2313-26
  4. Seeger C, Mason SW. Hepatitis B biology. Microbiol Mol Microbiol Rev 2000; 64:51-68
  5. Bozdayı AM, Aslan N, Türkyılmaz AR. Hepatitis B virus genotypes and subtypes, hepatitis C virus genotypes and hepatitis delta virus genotypes in Turkish patients with hepatitis virus infections. 2nd Molecular and Diagnostic Microbiology Congress. 2002, Antalya, Turkey
  6. Yaginuma K, Kobayashi M, Yoshida E, Koike K. Hepatitis B virus integration in hepatocellular carcinoma DNA: Duplication of cellular quanking sequences at the integration site. Proc Natl Acad Sci USA 1985; 82:4458-62
  7. Lindh M, Andersson AS, Gusdal A. Genotypes, nt 1858 variants, and geographic origin of hepatitis B virus-large-scale analysis using a new genotyping method. J Infect Dis 1997;175:1285-93
  8. Kato H, Orito E, Gish RG, Sugauchi, F, Suzuki S, Ueda R, et al. Characteristics of hepatitis B virus isolates of genotype G and their phylogenetic differences from the other six genotypes (A through F) Miyakawa, and Masashi Mizokami. J Virol 2002;76: 6131-37
  9. Günther S, Li BC, Miska S, Kriger HD, Meisel H, Will H. A novel method for efficient amplification of whole hepatitis B viral genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients. J Virol 1995;69:5
  10. Aşçı Z, Akbulut A, Doymaz ZM, Felek S, Kılıç SS. Evaluation of DNA of Hepatitis B virus in serum by PCR and comparison with the serological parameters of HBV. Viral Hepatit Derg 1996;2:6-9
  11. Maniatis T, Fritsch EF, Sambrook KJ. Molecular cloning: A laboratory manual, 1st ed. NY: Cold Spring Harbor Laboratory Press. 1982
  12. Sugauchi F, Orito E, Kato H, Suzuki S, Kawakita S, Sakamoto Y, et al. Genotype, serotype, and phylogenetic characterization of the complete genome sequence of hepatitis b virus isolates from Malawian chronic carriers of the virus. J Med Virology 2003;69:33-40
  13. Shan H, Niitsum