Journals / Turkish Journal of Agriculture and Forestry / 2001 / Cilt: 25 - Sayı: 3

Isolation and Characterization of Sequences Homologous to the Tobacco Clone Axi 1 (auxin independent) from a Vicia sativa Nodule cDNA Library

Pages
175–180
Publication Date
2001-03-01
DOI
—
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⚡ TL;DR(Too Long; Didn't Read)

It was shown that homolog sequences of axi 1 were expressed in flowers, leaves, stems, roots and nodules of the V. sativa plants.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:In this research, partial nucleotide sequences of the axi 1 gene, which is related to auxin perception and transduction, isolated from Vicia sativa using cDNA library screening were investigated.
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Key Findings & Data:Four V. sativa cDNA clones representing homologous of the tobacco axi 1 (auxin independent) cDNA clone were isolated and characterized.
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Conclusion & Impact:It was shown that homolog sequences of axi 1 were expressed in flowers, leaves, stems, roots and nodules of the V. sativa plants.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:axi 1 · auxin · gene isolation

Abstract

In this research, partial nucleotide sequences of the axi 1 gene, which is related to auxin perception and transduction, isolated from Vicia sativa using cDNA library screening were investigated. Four V. sativa cDNA clones representing homologous of the tobacco axi 1 (auxin independent) cDNA clone were isolated and characterized. With sequence analysis two different clones were observed, called 10/3a and 16/3b. Sequences about 500 bp from the 5' end and 450 bp from the 3' end were determined from the 10/3a clone. The sequences from the 5' end of cDNA clone 10/3a shared about 58 % similarity at the nucleotide level and 61% identity at the polypeptide level with the sequences of the Nicotiana tabacum axi 1 cDNA clone. At the 3' end of 10/3a, 63 % similarity at the nucleotide level was observed with the clone. In 16/3b about 500 bp was sequenced from the 5' end. There was 64 % nucleotide sequence similarity and 61 % polypeptide sequence identity. Northern blot analysis showed that the size of the mRNA was about 2 kb, like that of the axi 1 isolated from tobacco. It was shown that homolog sequences of axi 1 were expressed in flowers, leaves, stems, roots and nodules of the V. sativa plants.

Özet

In this research, partial nucleotide sequences of the axi 1 gene, which is related to auxin perception and transduction, isolated from Vicia sativa using cDNA library screening were investigated. Four V. sativa cDNA clones representing homologous of the tobacco axi 1 (auxin independent) cDNA clone were isolated and characterized. With sequence analysis two different clones were observed, called 10/3a and 16/3b. Sequences about 500 bp from the 5' end and 450 bp from the 3' end were determined from the 10/3a clone. The sequences from the 5' end of cDNA clone 10/3a shared about 58 % similarity at the nucleotide level and 61% identity at the polypeptide level with the sequences of the Nicotiana tabacum axi 1 cDNA clone. At the 3' end of 10/3a, 63 % similarity at the nucleotide level was observed with the clone. In 16/3b about 500 bp was sequenced from the 5' end. There was 64 % nucleotide sequence similarity and 61 % polypeptide sequence identity. Northern blot analysis showed that the size of the mRNA was about 2 kb, like that of the axi 1 isolated from tobacco. It was shown that homolog sequences of axi 1 were expressed in flowers, leaves, stems, roots and nodules of the V. sativa plants.

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Cite This Article

YALÇIN-MENDİ, Y., ÇETİNER, S. (2001). Isolation and Characterization of Sequences Homologous to the Tobacco Clone Axi 1 (auxin independent) from a Vicia sativa Nodule cDNA Library. Turkish Journal of Agriculture and Forestry, Cilt: 25 - Sayı: 3, 175–180. https://ajindex.com/articles/214583

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