Journals / Turkish Journal of Biology / 2012 / Cilt: 36 - Sayı: 3

Determination of genetic relationships among Velezia L. Caryophyllaceae) species using RAPD markers

Pages
293–302
Publication Date
2012-03-01
DOI
—
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Furthermore, it can be efficiently employed in future studies to provide preliminary data for conservation of endangered Velezia species.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Random amplified polymorphic DNA (RAPD) markers were used to determine genetic relationships among Velezia L. species from Turkey.
📊
Key Findings & Data:A total of 432 amplified bands were obtained using 14 RAPD primers.
💡
Conclusion & Impact:Furthermore, it can be efficiently employed in future studies to provide preliminary data for conservation of endangered Velezia species.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Key words: Genetic relationships · RAPD-PCR · Velezia L.

Abstract

Random amplified polymorphic DNA (RAPD) markers were used to determine genetic relationships among Velezia L. species from Turkey. A total of 432 amplified bands were obtained using 14 RAPD primers. The polymorphism in RAPD markers was high (98.61%) and was sufficient to distinguish each species. The degree of band-sharing was used for evaluating the genetic similarity between species and for constructing a dendrogram by the unweighted pair group method with arithmetic mean (UPGMA). Genetic relationships among the species were found to be fully consistent with those obtained by the use of morphological characters. Data obtained from our study demonstrated that the RAPD technique could be successfully used for the determination of genetic relationships among Velezia species and for species identification. Furthermore, it can be efficiently employed in future studies to provide preliminary data for conservation of endangered Velezia species.

Özet

Random amplified polymorphic DNA (RAPD) markers were used to determine genetic relationships among Velezia L. species from Turkey. A total of 432 amplified bands were obtained using 14 RAPD primers. The polymorphism in RAPD markers was high (98.61%) and was sufficient to distinguish each species. The degree of band-sharing was used for evaluating the genetic similarity between species and for constructing a dendrogram by the unweighted pair group method with arithmetic mean (UPGMA). Genetic relationships among the species were found to be fully consistent with those obtained by the use of morphological characters. Data obtained from our study demonstrated that the RAPD technique could be successfully used for the determination of genetic relationships among Velezia species and for species identification. Furthermore, it can be efficiently employed in future studies to provide preliminary data for conservation of endangered Velezia species.

🔖

Cite This Article

POYRAZ, İ. E., SÖZEN, E., ATAŞLAR, E., POYRAZ, İ. (2012). Determination of genetic relationships among Velezia L. Caryophyllaceae) species using RAPD markers. Turkish Journal of Biology, Cilt: 36 - Sayı: 3, 293–302. https://ajindex.com/articles/182511

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (11)

  1. Davis PH. Flora of Turkey and the East Aegean Islands. Edinburgh University Press. Edinburgh; 1967. Poyraz İE. Revision of Genus Velezia L. (Caryophyllaceae) in Turkey, PhD, Eskişehir Osmangazi University Institute of Science, 2008.
  2. Viccini LF, Souza da Costa DC, Machado MA et al. Genetic diversity among nine species of Lippia (Verbenaceae) based on RAPD markers. Plant Syst Evol 246: 1-8, 2004. 4. Ray T, Roy SC. Phylogenetic relationships between members of Amaranthaceae and Chenopodiaceae of Lower Gangetic Plains using RAPD and ISSR markers. Bangladesh J Bot 36: 21-28, 2007. Bardakçı F. Random amplifi ed polymorphic DNA (RAPD) markers. Turk J Biol 25: 185-196, 2001. 6. Williams JGK, Kubelik AR, Livak KJ et al. DNA polymorphisms amplifi ed by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18: 6531-6535, 1990.
  3. Hadrys H, Balick M, Schierwater B. Applications of random amplifi ed polymorphic DNA (RAPD) in molecular ecology. Mol Ecol 1: 55-63, 1992. Rieseberg LH. Homology among RAPD fragments in interspecifi c comparisons. Mol Ecol 5: 99-105, 1996. Bachmann K. Nuclear DNA markers in plant biosystematic research. Opera Bot 132: 137-148, 1997.
  4. Açık L, Ekici M, Çelebi A. Taxonomic relationships in Astragalus sections Hololeuce and Synochreati (Fabaceae): evidence from RAPD-PCR and SDS-PAGE of seed proteins. Ann Bot Fenn 41: 305-317, 2004.
  5. Goh MWK, Kumar PP, Lim SH et al. Random amplifi ed polymorphic DNA analysis of the moth orchids, Phalaenopsis (Epidendroideae: Orchidaceae). Euphytica 141: 11-22, 2005.
  6. Mattagajasingh I, Mukherjeea AK, Dasa P. Genomic relations among 31 species of Mammillaria Haworth (Cactaceae) using random amplifi ed polymorphic DNA. Z Naturforsch 61c: 583- 591, 2006.
  7. Chaudhary LB, Rana TS, Narzary D et al. A new species of Astragalus L. (Leguminosae) from India based on morphological and molecular markers. Bot J Linn Soc 154: 27- 34, 2007.
  8. Pendleton RL, Kitchen SG, Mudge J et al. Origin of the fl ax cultivar ‘Appar’ and its position within the Linum perene complex. Int J Plant Sci 169: 445-453, 2008.
  9. Çelebi A, Açık L, Aytaç Z. Biosystematics studies among Ebenus L. species based on morphological, RAPD-PCR, and seed protein analyses in Turkey. Pak J Bot 41: 2477-2486, 2009.
  10. Mahmood T, Muhammad S, Shinwari ZK. Molecular and morphological characterization of Caralluma species. Pak J Bot 42: 1163-1171, 2010.
  11. Aliyev RT, Abbasov MA, Mammadow AC. Genetic identifi cation of diploid and tetraploid wheat species with RAPD markers. T