Journals / Turkish Journal of Zoology / 2008 / Cilt: 32 - Sayı: 3

Mitochondrial DNA Sequence and Body Size Variations in Turkish Sardine (Sardina pilchardus) Stocks

Pages
229–237
Publication Date
2008-03-01
DOI
—
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AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

The results of this study suggest that sardine populations of coastal Turkey are part of a larger, self-recruiting population whose boundaries extend beyond the investigated area.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Sardine (Sardina pilchardus) is one of the most important species among Turkish fisheries and is broadly distributed along its coastal waters.
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Key Findings & Data:A fragment of sardine cytb DNA from each sample collected from 8 representative regions along the coastal zones was amplified by PCR analysis and subsequently sequenced.
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Conclusion & Impact:The results of this study suggest that sardine populations of coastal Turkey are part of a larger, self-recruiting population whose boundaries extend beyond the investigated area.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Sardine · Sardina pilchardus · mitochondrial DNA

Abstract

Sardine (Sardina pilchardus) is one of the most important species among Turkish fisheries and is broadly distributed along its coastal waters. In the present study, mitochondrial DNA sequences from the cytochrome b (cytb) gene were examined to assess the genetic diversity of sardines inhabiting Turkish coastal waters. A fragment of sardine cytb DNA from each sample collected from 8 representative regions along the coastal zones was amplified by PCR analysis and subsequently sequenced. The results of sequence analysis determined the existence of variations in 16 single nucleotide sites within the 452 bp fragment of the cytb gene examined in the present study. Phylogenetic trees and pairwise analyses demonstrated a very small divergence (0.002%-0.44%) between the populations, suggesting the lack of population subdivisions. Furthermore, the results of this study revealed a pattern of high nucleotide homology among the adjacent populations, and a small number of nucleotide changes among disjunct populations, leading us to conclude that there is a genetic admixture among the populations inhabiting the coastal waters of Turkey, especially in those geographically close to each other. The results of this study suggest that sardine populations of coastal Turkey are part of a larger, self-recruiting population whose boundaries extend beyond the investigated area.

Özet

Sardine (Sardina pilchardus) is one of the most important species among Turkish fisheries and is broadly distributed along its coastal waters. In the present study, mitochondrial DNA sequences from the cytochrome b (cytb) gene were examined to assess the genetic diversity of sardines inhabiting Turkish coastal waters. A fragment of sardine cytb DNA from each sample collected from 8 representative regions along the coastal zones was amplified by PCR analysis and subsequently sequenced. The results of sequence analysis determined the existence of variations in 16 single nucleotide sites within the 452 bp fragment of the cytb gene examined in the present study. Phylogenetic trees and pairwise analyses demonstrated a very small divergence (0.002%-0.44%) between the populations, suggesting the lack of population subdivisions. Furthermore, the results of this study revealed a pattern of high nucleotide homology among the adjacent populations, and a small number of nucleotide changes among disjunct populations, leading us to conclude that there is a genetic admixture among the populations inhabiting the coastal waters of Turkey, especially in those geographically close to each other. The results of this study suggest that sardine populations of coastal Turkey are part of a larger, self-recruiting population whose boundaries extend beyond the investigated area.

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Cite This Article

SARMAŞIK, A., ÇOLAKOĞLU, F. A., ALTUN, T. (2008). Mitochondrial DNA Sequence and Body Size Variations in Turkish Sardine (Sardina pilchardus) Stocks. Turkish Journal of Zoology, Cilt: 32 - Sayı: 3, 229–237. https://ajindex.com/articles/177267

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References (14)

  1. Aksıray, F. 1987. Türkiye Deniz Balıkları ve Tayin Anahtarları, İstanbul Universitesi Rektörlüğü Yayınları,
  2. İstanbul.
  3. Atarhouch, T., Rüber, L., Gonzalez, E. G., Albert, E. M., Rami, M., Dakkak, A. and Zardoya, R. 2005. Signature of an early genetic bottleneck in a population of Moroccan sardines (Sardina pilchardus). Molecular Phylogenetics and Evolution, In Press,
  4. Corrected Proof, Available online 7 October. Avise, J.C. 2000.
  5. Phylogeography. Harvard Univ. Press,
  6. Cambridge, MA, USA. Belveze, H. and Erzini, K. 1983. The influence of hydroclimatic factors on the availability of the sardine (Sardina pilchardus, Walbaum) in the Moroccan Atlantic fishery. FAO Fish Rep. 291: pp. 285-328.
  7. Beverton, R.J.H. 1990. Small marine pelagic fish and the threat of fishing: are they endangered. J. Fish Biol. 37: 5-16.
  8. Borsa, P. 2002. Allozyme, mitochondrial-DNA, and morphometric variability indicate cryptic species of anchovy (Engraulis encrasicolus). Biol. J. the Linnean Soc. 75: 261-269.
  9. Borsa, P., Collet, A. and Durand, J.D. 2004. Nuclear-DNA markers confirm the presence of two anchovy species in the Mediterranean. Comptes Rendus Biologies. 327: 1113-1123.
  10. Brown, W.M. 1983. Evolution of animal mitochondrial DNA. In: Evolution of genes and proteins. (eds. M. Nei and R.K. Koehn), Sinauer, Sunderland, Mass. pp. 62-88.
  11. Chikhi, L., Agnese, J.F. and Bonhomme, F. 1997. Fortes differences des ADN mitochondriaux de populations de Sardinella aurita de la mer Mediterranee et de l’Atlantique Est. Comptes Rendus de l’Academie des Sciences–Series III–Sciences de la Vie 320: 289- 297. Cihangir, B. 1996.
  12. Reproduction of European Pilchard, Sardina pilchardus (Walbaum, 1792) in the Aegean Sea. Turk. J. Zool. 20: 33-50. DIE, 2004. 2004. Yılı Su Ürünleri İstatistikleri. T.C. Başbakanlık Devlet İstatistik Enstitüsü, Ankara. FAO, 1999. 1988-1997. Aquaculture Production Statistics. FAO Fisheries Circular, No: 815, Rev.11, Rome. Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
  13. Felsenstein, J. 1995. PHYLIP (Phylogeny Inference Package). University of Washington, Seattle. Finney, B.P., Gregory-Eaves, I., Douglas, M.S.V. and Smol, J.P. 2002. Fisheries productivity in the northeastern Pacific Ocean over the last 2200 years. Nature 416: 729-33
  14. Grant, W.A.S. and Bowen, B.W. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J. Hered.