Journals / Bozok Tıp Dergisi / 2026 / Cilt: 16 Sayı: 3

ANTIMICROBIAL RESISTANCE TRENDS AMONG UROPATHOGENS ISOLATED FROM URINE CULTURES AT A TERTIARY CARE HOSPITAL: A SIX-YEAR RETROSPECTIVE ANALYSIS (2019-2024)

Bir Üçüncü Basamak Hastanede İdrar Kültürlerinden İzole Edilen Üropatojenlerin Antimikrobiyal Direnç Trendleri: Altı Yıllık Retrospektif Analiz (2019-2024)

Cihat Öztürk(Kırşehir Ahi Evran Üniversitesi Tıp Fakültesi Tıbbi Mikrobiyoloji)0000-0003-2868-2317
Tuğba Avan Mutlu(AHI EVRAN UNIVERSITY, SCHOOL OF MEDICINE)0000-0001-7242-9971
Pages
487–501
Publication Date
2026-09-25
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Annual updating of institution-specific antibiograms, systematic testing of last-resort agents, and reinforced antimicrobial stewardship programs are urgently needed.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:Objective: This study aimed to evaluate the distribution of uropathogens and temporal trends in antimicrobial resistance among urine culture isolates from a tertiary care center in central Türkiye over a six-year period (2019-2024).
📊
Key Findings & Data:Material and Methods: A total of 16,220 urine culture isolates were retrospectively analyzed.
💡
Conclusion & Impact:Annual updating of institution-specific antibiograms, systematic testing of last-resort agents, and reinforced antimicrobial stewardship programs are urgently needed.
🔬Design:Araştırma Makalesi
📍Scope:2019-2024 Verileri
⚙️Variables:Antimikrobiyal Direnç · Üropatojen · Sürveyansı

Abstract

Objective: This study aimed to evaluate the distribution of uropathogens and temporal trends in antimicrobial resistance among urine culture isolates from a tertiary care center in central Türkiye over a six-year period (2019-2024). Material and Methods: A total of 16,220 urine culture isolates were retrospectively analyzed. Bacterial identification was performed using the VITEK® 2 system, and antimicrobial susceptibility testing was conducted using VITEK® 2 AST cards and/or Kirby-Bauer disk diffusion. Results were interpreted according to EUCAST breakpoints. In the statistical analyses, the Pearson chi-square test and the trend chi-square test were used. The significance level was set at p<0.05. Results: Female patients constituted 63.0-67.3% of all isolates. Gram-negative bacteria predominated (68.0-83.4% annually). ICU-derived isolates peaked during 2020-2021 (32.1% and 30.1%, respectively), coinciding with the COVID-19 pandemic. Escherichia coli was the most frequently isolated uropathogen; ciprofloxacin resistance declined from 51.2% (2019) to 34.8% (2024), while ertapenem resistance increased from 1.0% to 3.1%. Klebsiella pneumoniae showed the most alarming resistance escalation, with ertapenem resistance reaching 43.0% in 2022, colistin resistance peaking at 63.6% in 2022, and ceftazidime resistance reaching 96.8% in 2024. Acinetobacter baumannii demonstrated near-pandrug-resistant profiles throughout the study period. Vancomycin-resistant Enterococcus faecium rates declined significantly from 50.0% (2020) to 20.7% (2024) (p<0.001), while linezolid remained active (0.0-3.7% resistance). Conclusion: This study documents a progressively challenging resistance landscape, particularly for carbapenem-resistant K. pneumoniae and A. baumannii. Annual updating of institution-specific antibiograms, systematic testing of last-resort agents, and reinforced antimicrobial stewardship programs are urgently needed.

Özet

Amaç: Bu çalışma, Orta Anadolu'daki bir üçüncü basamak merkezde 2019-2024 yılları arasında idrar kültürü izolatlarında üropatojen dağılımını ve antimikrobiyal direnç trendlerini değerlendirmeyi amaçlamaktadır. Gereç ve Yöntemler: Toplam 16.220 idrar kültürü izolatı retrospektif olarak incelendi. Bakteri tanımlaması VITEK® 2 sistemi ile, antimikrobiyal duyarlılık testi VITEK® 2 AST kartları ve/veya Kirby-Bauer disk difüzyon yöntemiyle gerçekleştirildi. Sonuçlar EUCAST sınır değerlerine göre yorumlandı. İstatistiksel analizlerde Pearson ki-kare ve trend ki-kare testi kullanıldı. Anlamlılık eşiği p<0,05 olarak belirlendi. Bulgular: Tüm izolatlarda kadın hastalar %63,0-67,3 oranında baskındı. Gram-negatif bakteriler yıllık %68,0-83,4 oranıyla predominant olarak izlendi. COVID-19 pandemisiyle örtüşen 2020-2021 döneminde yoğun bakım kaynaklı izolatlar belirgin şekilde arttı (sırasıyla %32,1 ve %30,1). Escherichia coli en sık izole edilen üropatojen oldu; siprofloksasin direnci 2019'daki %51,2'den 2024'te %34,8'e gerilerken ertapenem direnci %1,0'dan %3,1'e yükseldi. Klebsiella pneumoniae'de en endişe verici direnç artışı gözlemlendi: ertapenem direnci 2022'de %43,0'a, kolistin direnci %63,6'ya, seftazidim direnci 2024'te %96,8'e ulaştı. Acinetobacter baumannii çalışma boyunca neredeyse pandirençli profil sergiledi. Vankomisin dirençli Enterococcus faecium oranları 2020'deki %50,0'dan 2024'te %20,7'ye anlamlı biçimde geriledi (p<0,001); linezolid aktivitesini korudu (%0,0-3,7 direnç). Sonuç: Bu çalışma, özellikle karbapenem dirençli K. pneumoniae ve A. baumannii açısından giderek zorlaşan bir direnç tablosunu ortaya koymaktadır. Kuruma özgü antibiyogramların yıllık güncellenmesi, son çare ajanlara yönelik sistematik duyarlılık testlerinin uygulanması ve antimikrobiyal yönetim programlarının güçlendirilmesi acil gerekliliklerdir.

🔖

Cite This Article

Öztürk, C., Mutlu, T. A. (2026). ANTIMICROBIAL RESISTANCE TRENDS AMONG UROPATHOGENS ISOLATED FROM URINE CULTURES AT A TERTIARY CARE HOSPITAL: A SIX-YEAR RETROSPECTIVE ANALYSIS (2019-2024). Bozok Tıp Dergisi, Cilt: 16 Sayı: 3, 487–501. https://doi.org/10.16919/bozoktip.1928576

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (31)

  1. Flores-Mireles AL, Walker JN, Caparon M, Hultgren SJ. Urinary tract infections:epidemiology, mechanisms of infection and treatment options. Nat Rev Microbiol., 2015. 13(5):269–84.
  2. Foxman B. Urinary tract infection syndromes:occurrence, recurrence, bacteriology, risk factors, and disease burden. Infect Dis Clin, 2014. 28(1):1–13.
  3. Xu X, Wang Y, Li N, Jin Y, Xu X, Zhou Z, et al. Uropathogen profiles and their antimicrobial resistance patterns in patients:a three-year retrospective study in Sichuan region. Front Public Health, 2025. 13:1493980.
  4. Maraki S, Mavromanolaki VE, Stafylaki D, Iliaki-Giannakoudaki E, Kasimati A. Antimicrobial resistance trends among Klebsiella pneumoniae associated with urinary tract infections in Crete, Greece, 2017–2022. Acta Microbiol Immunol Hung, 2024. 71(2):121–6.
  5. Farag PF, Albulushi HO, Eskembaji MH, Habash MF, Malki MS, Albadrani MS, et al. Prevalence and antibiotic resistance profile of UTI-causing uropathogenic bacteria in diabetics and non-diabetics at the Maternity and Children Hospital in Jeddah, Saudi Arabia. Front Microbiol, 2024. 15:1507505.
  6. Ayhan M, Kaya Kalem A, Hasanoğlu İ, Kayaaslan B, Güner R. Geriatrik hastalarda idrar yolu enfeksiyonları ve etkenlerinin değerlendirilmesi. Turk Hij Den Biyol Derg. 2022. 79(1):115-22.
  7. Özkan BB, Günal Ö, Demirag MD, Sözen S, Kilic SS. Evaluation of Patients Followed with Complicated Urinary Tract Infection:A Single Centre Experience. JICM. 2024. 9(2):34–44.
  8. Kalyoncu BN, Koçoğlu ME, Özekinci T, Biçer RT, Aydın G, Önder N ve ark. İstanbul’da bir şehir hastanesinde izole edilen üriner sistem patojenleri ve antibiyotik direnç profillerinin değerlendirilmesi. ANKEM Dergisi, 2023. 37(1):18–27.
  9. Duran H, Çeken N, Kula Atik T. İdrar kültüründen izole edilen Escherichia coli ve Klebsiella pneumoniae suşlarının antibiyotik direnç oranları:Dört yıllık analiz. ANKEM Dergisi, 2020. 34(2):41–7.
  10. Mert D, Çeken S, Ertek M. The isolated bacteria from culture and antibiotic susceptibilities in urinary tract infections. Turk Hij Den Biyol Derg. 2020. 77(1):25–32.
  11. Keskin BH, Çalışkan E, Kaya S, Köse E, Şahin İ. Üriner sistem enfeksiyonlarında etken bakteriler ve antibiyotik direnç oranları. Turk Mikrobiyol Cemiy Derg, 2021. 51(3):254–62.
  12. Bozkurt NB, Öztürk A, Mutlu TA. In Vitro Antibiotic Susceptibility and Species Distribution of Uropathogenic Agents Isolated from Urine Cultures. MUSKUTD. 2025. 12(3):212–20.
  13. Çilburunoğlu M, Kirişci Ö, Yerlikaya H, Uğurlu H, Aral M, Muratdağı G. Bir üniversite hastanesine gönderilen idrar kültürlerinde üreyen izolatların dağılımı ve antimikrobiyal duyarlılık profilinin incelenmesi. Sakarya Med J. 2020. 10(4):677–83.
  14. Hooton TM, Bradley SF, Cardenas DD, Colgan R, Geerlings SE, Rice JC, et al. Diagnosis, prevention, and treatment of catheter-associated urinary tract infection in adults:2009 International Clinical Practice Guidelines from the Infectious Diseases Society of America. Clin Infect Dis, 2010. 50(5):625–63.
  15. Wallet F, Loïez C, Renaux E, Lemaitre N, Courcol RJ. Performances of VITEK 2 colorimetric cards for identification of gram-positive and gram-negative bacteria. J Clin Microbiol, 2005. 43(9):4402–6.
  16. Ligozzi M, Bernini C, Bonora MG, De Fatima M, Zuliani J, Fontana R. Evaluation of the VITEK 2 system for identification and antimicrobial susceptibility testing of medically relevant gram-positive cocci. J Clin Microbiol, 2002. 40(5):1681–6.
  17. Kadri SS, Adjemian J, Lai YL, Spaulding AB, Ricotta E, Prevots DR, et al. Difficult-to-treat resistance in gram-negative bacteremia at 173 US hospitals:retrospective cohort analysis of prevalence, predictors, and outcome of resistance to all first-line agents. Clin Infect Dis, 2018. 67(12):1803–14.
  18. Magiorakos AP, Srinivasan A, Carey RB, Carmeli Y, Falagas ME, Giske CG, et al. Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria:an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect, 2012. 18(3):268–81.
  19. Petrie A, Sabin C. Medical Statistics at a Glance. 4th ed. Hoboken, NJ:Wiley-Blackwell;2019. p. 66-71.
  20. Dyar OJ, Huttner B, Schouten J, Pulcini C. What is antimicrobial stewardship? Clin Microbiol Infect, 2017. 23(11):793–8.
  21. Rawson TM, Moore LSP, Zhu N, Ranganathan N, Skolimowska K, Gilchrist M, et al. Bacterial and fungal coinfection in individuals with coronavirus:a rapid review to support COVID-19 antimicrobial prescribing. Clin Infect Dis, 2020. 71(9):2459–68.
  22. Contou D, Claudinon A, Pajot O, Micaëlo M, Longuet Flandre P, Dubert M, et al. Bacterial and viral co-infections in patients with severe SARS-CoV-2 pneumonia admitted to a French ICU. Ann Intensive Care, 2020. 10(1):1–9.
  23. Langford BJ, So M, Simeonova M, Leung V, Lo J, Kan T, et al. Antimicrobial resistance in patients with COVID-19:a systematic review and meta-analysis. Lancet Microbe, 2023. 4(3):e179–e91.
  24. European Centre for Disease Prevention and Control, European Food Safety Authority, European Medicines Agency, Organisation for Economic Co-operation and Development. Antimicrobial Resistance in the EU/EEA:A One Health Response. Solna:European Centre for Disease Prevention and Control;2022 [cited February 2024]. Available from:https://www.ecdc. europa.eu/en/publications-data/antimicrobial-resistance-eueea-one-health-response
  25. Breidenstein EBM, de la Fuente-Núñez C, Hancock REW. Pseudomonas aeruginosa:all roads lead to resistance. Trends Microbiol, 2011. 19(8):419–26.
  26. Livermore DM. Multiple mechanisms of antimicrobial resistance in Pseudomonas aeruginosa:our worst nightmare? Clin Infect Dis, 2002. 34(5):634–40.
  27. Piccinelli G, Biscaro V, Gargiulo F, Caruso A, De Francesco MA. Characterization and antibiotic susceptibility of Streptococcus agalactiae isolates causing urinary tract infections. Infect Genet Evol, 2015. 34:1–6.
  28. Dobrut A, Ochońska D, Brzozowska E, Górska S, Kaszuba-Zwoinska J, Gołda-Cępa M, et al. Molecular characteristic, antibiotic resistance, and detection of highly immunoreactive proteins of group B Streptococcus strains isolated from urinary tract infections in polish adults. Front Microbiol, 2022. 13:809724.
  29. Van Duin D, Lok JJ, Earley M, Cober E, Richter SS, Perez F, et al. Colistin versus ceftazidime-avibactam in the treatment of infections due to carbapenem-resistant Enterobacteriaceae. Clin Infect Dis, 2018. 66(2):163–71.
  30. Tamma PD, Heil EL, Justo JA, Mathers AJ, Satlin MJ, Bonomo RA. Infectious Diseases Society of America 2024 guidance on the treatment of antimicrobial-resistant gram-negative infections. Clin Infect Dis, 2024:ciae403.
  31. Shields RK, Paterson DL, Tamma PD. Navigating available treatment options for carbapenem- resistant Acinetobacter baumannii-calcoaceticus complex infections. Clin Infect Dis, 2023;76(Supplement_2):S179–S93.