Journals / Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi / 2026 / Cilt: 25 Sayı: 2

Synthesis and 3D Crystal Structure of New [C15H16B3N3O5].[Pd(SCN)4].2(H2O) Compound of Containing [Pd(SCN)4]-2 and Boroxine

[Pd(SCN)4]-2 ve Boroksin İçeren Yeni [C15H16B3N3O5].[Pd(SCN)4].2(H2O) Bileşiğin Sentezi ve 3D Kristal Yapısı

Hülya Kara Subasat(MUĞLA SITKI KOÇMAN ÜNİVERSİTESİ)0000-0002-2032-8930
Elif Güngör(BALIKESİR ÜNİVERSİTESİ)0000-0002-7158-9604
Pages
390–394
Publication Date
2021-08-20
🏛️Bibliographic metadata and full text access for this article are provided via DergiPark.
DergiPark Record ↗
✨

AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Pd-SCN···HO (boroxine), Pd-SCN···HO (water) and OH···O hydrogen bond interactions in combination of boroxine with [Pd(SCN)4]-2 forms 1D, 2D and 3D periodic structures.

📌 3 Key Takeaways

🎯
Objective & Hypothesis:In this work, [C15H16B3N3O5].[Pd(SCN)4].2(H2O) has been synthesized and the crystal structure of the compound was determined by the X-ray diffraction method.
📊
Key Findings & Data:X-Rays analysis shows the compound crystallizes in monoclinic system, space group P21/c, a=10.515 Å, b= 24.947 Å, c= 15.078 Å, 𝛼=90, β=134.215, γ=90, V=2834.8 Å3, Z=4.
💡
Conclusion & Impact:Pd-SCN···HO (boroxine), Pd-SCN···HO (water) and OH···O hydrogen bond interactions in combination of boroxine with [Pd(SCN)4]-2 forms 1D, 2D and 3D periodic structures.
🔬Design:Araştırma Makalesi
📍Scope:Comprehensive Sample
⚙️Variables:Boroksin bileşiği · Tek kristal yapı · Hidrojen bağ etkileşimleri

Abstract

In this work, [C15H16B3N3O5].[Pd(SCN)4].2(H2O) has been synthesized and the crystal structure of the compound was determined by the X-ray diffraction method. X-Rays analysis shows the compound crystallizes in monoclinic system, space group P21/c, a=10.515 Å, b= 24.947 Å, c= 15.078 Å, 𝛼=90, β=134.215, γ=90, V=2834.8 Å3, Z=4. The anion [Pd(SCN)4]-2 in the compound has a slightly distorted square geometry around the center of the Pd atom. In the boroxine structure, the three covalent linked boron atom has a slightly distorted trigonal planar geometry while the four covalent linked boron atoms have a slightly distorted tetrahedral geometry. Pd-SCN···HO (boroxine), Pd-SCN···HO (water) and OH···O hydrogen bond interactions in combination of boroxine with [Pd(SCN)4]-2 forms 1D, 2D and 3D periodic structures.

Özet

Bu çalışmada yeni [C15H16B3N3O5].[Pd(SCN)4].2(H2O) bileşiği sentezlendi ve bileşiğin kristal yapısı X-ışını kırınım yöntemiyle belirlendi. Kristalin X-ışınları analizi bileşiğin monoklinik P21/c uzay grubu ile, a=10.515 Å, b= 24.947 Å, c= 15.078 Å, 𝛼=90, β=134.215, γ=90, V=2834.8 Å3, Z=4 birim hücre parametrelerinde kristallendiğini gösterdi. Bileşikteki [Pd(SCN)4]-2 anyonu, Pd atomunun merkezi etrafında hafifçe bozulmuş bir kare geometriye sahiptir. Boroksin yapısında üç kovalent bağlı bor atomu hafifçe bozulmuş trigonal düzlemsel geometriye sahipken, dört kovalent bağlı bor atomları hafifçe bozulmuş tetrahedral geometriye sahiptir. Boroksin ile [Pd(SCN)4]-2 ‘nın kombinasyonundaki Pd-SCN···HO (boroksin), Pd-SCN···HO (su) ve O-H···O hidrojen bağ etkileşimleri 1D, 2D ve 3D periyodik yapılar oluşturmaktadır.

🔖

Cite This Article

Üstündağ, F. D., Subasat, H. K., Güngör, E. (2021). Synthesis and 3D Crystal Structure of New [C15H16B3N3O5].[Pd(SCN)4].2(H2O) Compound of Containing [Pd(SCN)4]-2 and Boroxine. Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi, Cilt: 25 Sayı: 2, 390–394. https://doi.org/10.19113/sdufenbed.874653

📄 Full Text PDF Viewer

📄

PDF görüntüleyici hazırlanıyor...

References (27)

  1. Kara, H., Adams, C. J., Orpen, A. G., Podesta, T. J. 2006. Pyridinium Boronic Acid Salts in Crystal Synthesis. New Journal of Chemistry, 30(10), 1461-1469.
  2. Dai, C., Cheng, Y., Cui, J., Wang, B. 2010. Click Reactions and Boronic Acids: Applications, Issues, and Potential Solutions. Molecules, 15(8), 5768-5781.
  3. Brooks, W. L., Sumerlin, B. S. 2016. Synthesis and Applications of Boronic Acid-Containing Polymers: from Materials to Medicine. Chemical Reviews, 116(3), 1375-1397.
  4. Pedireddi, V. R., Seetha Lekshmi, N. 2004. Boronic Acids in the Design and Synthesis of Supramolecular Assemblies. Tetrahedron Letters, 45(9), 1903-1906.
  5. Whyte, G. F., Vilar, R., Woscholski, R. 2013. Molecular Recognition with Boronic Acids-Applications in Chemical Biology. Journal of Chemical Biology, 6(4), 161-174.
  6. Hall, D. G. 2011. In Boronic Acids: Preparation and Applications in Organic Synthesis, Medicine and Materials, 2nd Edition, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany.
  7. Cai, D., Larsen, R. D., Reider, P. J. 2002. Effective Lithiation of 3-bromopyridine: Synthesis of 3-Pyridine Boronic Acid and Variously 3-Substituted Pyridines. Tetrahedron Letters, 43(23), 4285-4287.
  8. Cambre, J. N., Sumerlin, B. S. 2011. Biomedical Applications of Bboronic Acid Polymers. Polymer, 52(21), 4631-4643.
  9. Yang, W., Gao, X., Wang, B. 2003. Boronic Acid Compounds as Potential Pharmaceutical Agents. Medicinal Research Reviews, 23(3), 346-368.
  10. Lee, J. H., Kim, Y., Ha, M. Y., Lee, E. K., Choo, J. 2005. Immobilization of Aminophenylboronic Acid on Magnetic Beads for the Direct Determination of Glycoproteins by Matrix Assisted Laser Desorption İonization Mass Spectrometry. Journal of the American Society for Mass Spectrometry, 16(9), 1456-1460.
  11. Murabayashi, S., Nishide, T., Mitamura, Y. 2002. In Vitro Evaluation of Newly Developed Adsorbent for Selective Removal of Glycosylated Low‐Density Lipoprotein. Therapeutic Apheresis, 6(6), 425-430.
  12. Özdemir, A., Tuncel, A. 2000. Boronic Acid–Functionalized HEMA‐Based Gels for Nucleotide Adsorption. Journal of Applied Polymer Science, 78(2), 268-277.
  13. Bhat, S. S., Kumbhar, A. A., Heptullah, H., Khan, A. A., Gobre, V. V., Gejji, S. P., Puranik, V. G. 2011. Synthesis, Electronic Structure, DNA and Protein Binding, DNA Cleavage, and Anticancer Activity of Fluorophore-Labeled Copper (II) Complexes. Inorganic Chemistry, 50(2), 545-558.
  14. Braga, D., Polito, M., Bracaccini, M., D'Addario, D., Tagliavini, E., Sturba, L., Grepioni, F. 2003. Novel Organometallic Building Blocks for Molecular Crystal Engineering. 2. Synthesis and Characterization of Pyridyl and Pyrimidyl Derivatives of Diboronic Acid,[Fe(η5-C5H4-B (OH)2)2], and of Pyridyl Boronic Acid,[Fe(η5-C5H4-4-C5H4N)(η5-C5H4-B (OH) 2)]. Organometallics, 22(10), 2142-2150.
  15. Aakery, C. B., Salmon, D. J. 2005. Building Co-Crystals with Molecular Sense and Supramolecular Sensibility. CrystEngComm, 7, 439–448.
  16. Hassan, H. 2016. Preparation, Structural and Thermal Studies of Boroxine Adducts Having Aryl Boronic Acids and Pyrazoles. African Journal of Pure and Applied Chemistry, 10(4), 42-55.
  17. Campos-Gaxiola, J. J., García-Grajeda, B. A., Hernández-Ahuactzi, I. F., Guerrero-Álvarez, J. A., Höpfl, H., Cruz-Enríquez, A. 2017. Supramolecular Networks in Molecular Complexes of Pyridine Boronic Acids and Polycarboxylic Acids: Synthesis, Structural Characterization and Fluorescence Properties. CrystEngComm, 19(27), 3760-3775.
  18. Erkarslan, U., Donmez, A., Kara, H., Aygun, M., Coban, M. B. 2018. Synthesis, Structure and Photoluminescence Performance of a New Er 3+-Cluster-Based 2D Coordination Polymer. Journal of Cluster Science, 29(6), 1177-1183.
  19. Coban, M. B., Erkarslan, U., Oylumluoglu, G., Aygun, M., Kara, H. 2016. Hydrothermal Synthesis, Crystal Structure and Photoluminescent Properties; 3D Holmium (III) Coordination Polymer. Inorganica Chimica Acta, 447, 87-91.
  20. Kocak, C., Oylumluoglu, G., Donmez, A., Coban, M. B., Erkarslan, U., Aygun, M., Kara, H. 2017. Crystal Structure and Photoluminescence Properties of a New Monomeric Copper (II) Complex: Bis (3-{[(3-hydroxypropyl) imino] methyl}-4-nitrophenolato-κ3O, N, O′) Copper (II). Acta Crystallographica Section C: Structural Chemistry, 73(5), 414-419.
  21. Erkarslan, U., Oylumluoglu, G., Coban, M. B., Öztürk, E., Kara, H. 2016. Cyanide-Bridged Trinuclear MnIII–FeIII Assembly: Crystal Structure, Magnetic and Photoluminescence Behavior. Inorganica Chimica Acta, 445, 57-61.
  22. Donmez, A., Oylumluoglu, G., Coban, M. B., Kocak, C., Aygun, M., Kara, H. 2017. Ferromagnetic Interactions in New Double end-on-Azide-Bridged Dinuclear Ni (II) Complex: Synthesis, Crystal Structures, Magnetic and Photoluminescence Properties. Journal of Molecular Structure, 1149, 569-575.
  23. Kara, H., Adams, C. J., Schwarz, B., Orpen, A. G. 2011. The Use of [Fe (dithiooxalate) 2(NO)]2− as a Tecton in Crystal Engineering. CrystEngComm, 13(16), 5082-5087.
  24. Sadabs. 2008. SAINT V7. 60A, SHELXTL V6. 14. Bruker AXS Inc., Madison, Wisconsin, USA.
  25. Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A., Puschmann, H. 2009. OLEX2: a Complete Structure Solution, Refinement and Analysis Program. Journal of Applied Crystallography, 42(2), 339-341.
  26. Sheldrick, G. M. 2008. A short History of SHELX. Acta Crystallographica Section A: Foundations of Crystallography, 64(1), 112-122.
  27. Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Streek, J. V. D. 2006. Mercury: Visualization and Analysis of Crystal Structures. Journal of Applied Crystallography, 39(3), 453-457.