Journals / Turkish Journal of Veterinary and Animal Sciences / 2017 / Cilt: 41 - Sayı: 2

Salmonella Enteritidis predominance determined by serotyping and real-time PCR in poultry-derived food and avian isolates

Pages
187–192
Publication Date
2017-04-19
DOI
—
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AI Summary & Key Takeaways

AI Insight
⚡ TL;DR(Too Long; Didn't Read)

Considerably high relative accuracy (98%), sensitivity (100%), and specificity (96%) with almost perfect agreement between the two methods (Cohen's kappa = 0.96) indicated SE-rPCR as a reliable tool in the rapid identification of SE isolates to complement conventional serotyping.

📌 3 Key Takeaways

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Objective & Hypothesis:This study aimed to determine Salmonella enterica subspecies enterica serovar Enteritidis (SE) presence by conventional serotyping and SE-specific real-time PCR (SE-rPCR) in poultry-derived food and avian isolates in our laboratory Salmonella spp. collection.
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Key Findings & Data:Conventional serotyping indicated that 32 (8 chicken meat, 10 egg, 14 avian) out of 56 (57%) isolates were SE, whereas 8 (3 chicken meat, 2 turkey meat, 3 avian) (14%) isolates were serogroup B, 6 (1 chicken meat, 1 egg, 4 avian) (11%) were serogroup C1, 4 (3 chicken meat, 1 turkey meat) (7%) were serogroup C2-C3, 4 (3 chicken meat, 1 turkey meat) (7%) were serogroup E4, and 2 (avian) (4%) isolates were categorized as nonserogrouped/nonserotyped.
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Conclusion & Impact:Considerably high relative accuracy (98%), sensitivity (100%), and specificity (96%) with almost perfect agreement between the two methods (Cohen's kappa = 0.96) indicated SE-rPCR as a reliable tool in the rapid identification of SE isolates to complement conventional serotyping.
🔬Design:Research Article
📍Scope:Comprehensive Sample
⚙️Variables:Salmonella Enteritidis · real-time PCR · serotyping

Abstract

This study aimed to determine Salmonella enterica subspecies enterica serovar Enteritidis (SE) presence by conventional serotyping and SE-specific real-time PCR (SE-rPCR) in poultry-derived food and avian isolates in our laboratory Salmonella spp. collection. Conventional serotyping indicated that 32 (8 chicken meat, 10 egg, 14 avian) out of 56 (57%) isolates were SE, whereas 8 (3 chicken meat, 2 turkey meat, 3 avian) (14%) isolates were serogroup B, 6 (1 chicken meat, 1 egg, 4 avian) (11%) were serogroup C1, 4 (3 chicken meat, 1 turkey meat) (7%) were serogroup C2-C3, 4 (3 chicken meat, 1 turkey meat) (7%) were serogroup E4, and 2 (avian) (4%) isolates were categorized as nonserogrouped/nonserotyped. Thirty-three (8/18 chicken meat, 10/11 egg, 15/23 avian) out of 56 (59%) Salmonella isolates were positive by SE-rPCR. SE was determined as the most prevalent serotype in both of the tests regardless of the sample type. Conventional serotyping and SE-rPCR results were in agreement in all but 1 isolate. Considerably high relative accuracy (98%), sensitivity (100%), and specificity (96%) with almost perfect agreement between the two methods (Cohen's kappa = 0.96) indicated SE-rPCR as a reliable tool in the rapid identification of SE isolates to complement conventional serotyping.

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Cite This Article

ATA, Z., TEMELLİ, S., EYİGÖR, A., CARLI, K. T. (2017). Salmonella Enteritidis predominance determined by serotyping and real-time PCR in poultry-derived food and avian isolates. Turkish Journal of Veterinary and Animal Sciences, Cilt: 41 - Sayı: 2, 187–192. https://ajindex.com/articles/121530

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References (9)

  1. EFSA, ECDC. The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2012. EFSA J 2014; 12: 3547. European Council. Regulation (EC) No 2160/2003 of the European Parliament and of the Council and Regulation of 17 November 2003 on the Control of Salmonella and Other Specified Food-Borne Zoonotic Agents. OJ L 325, 12.12.2003.
  2. Brussels, Belgium: European Council; 2003. European Council. Regulation on the Control of Salmonella and Other Specified Food-Borne Zoonotic Agents. Official Journal 27.03.2014; 28954. Brussels, Belgium: European Council; 2014.
  3. Grimont PAD, Weill FX. Antigenic Formulae of the Salmonella Serovars. 9th ed. Paris, France: WHO Collaborating Centre for Reference and Research on Salmonella; 2007.
  4. Guibourdenche M, Roggentin P, Mikoleit M, Fields PI, Bockemühl J, Grimont PA, Weill FX. Supplement 2003-2007 (No. 47) to the White-Kauffmann-Le Minor scheme. Res Microbiol 2010; 161: 26-29.
  5. Wang SJ, Yeh DB, Wei CI. Specific PCR primers for the identification of Salmonella enterica serovar Enteritidis in chicken-related samples. J Food Drug Anal 2009; 3: 183-189.
  6. Saeki EK, Alves J, Bonfante RC, Hirooka EY, De Oliveira TCRM. Multiplex PCR (mPCR) for the detection of Salmonella spp. and the differentiation of the Typhimurium and Enteritidis serovars in chicken meat. J Food Safety 2013; 33: 25-29.
  7. Maurischat S, Baumann B, Martin A, Malorny B. Rapid detection and specific differentiation of Salmonella enterica subsp. enterica Enteritidis, Typhimurium and its monophasic variant 4,[5],12:i:- by real-time multiplex PCR. Int J Food Microbiol 2015; 193: 8-14.
  8. Lungu B, Waltman WD, Berghaus RD, Hofacre CL. Comparison of a real-time PCR method with a culture method for the detection of Salmonella enterica serotype Enteritidis in naturally contaminated environmental samples from integrated poultry houses. J Food Prot 2012; 75: 743-747.
  9. Coven F, Asiklar B, Coven N, Nalbantsoy A. Screening of Salmonella Enteritidis specific O and H antiserum potency against isolated field strains of Salmonella from Aegean region. Acta Sci Vet 2015; 43: 1272. Kahya S, Kesin Tuğ B, Temelli S, Carli KT, Eyigor A. Detection of Salmonella from layer flocks and typing of the isolates. Kafkas Univ Vet Fak Derg 2014; 20: 939-944 (in Turkish with English abstract). Dumen E, Aydin A, Issa G. Prevalence, serological typing and PCR sensitivity comparison of Salmonella Typhimurium, Salmonella Enteritidis and Salmonella spp. isolated from r